Pelolinea submarina: Pelsub_P0532
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Entry
Pelsub_P0532 CDS
T05783
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
psub
Pelolinea submarina
Brite
KEGG Orthology (KO) [BR:
psub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psub03400
]
Pelsub_P0532
DNA repair and recombination proteins [BR:
psub03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Pelsub_P0532
Archaeal homologous recombinant proteins
Pelsub_P0532
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
Spo16_N
Motif
Other DBs
NCBI-ProteinID:
BBB47305
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All DBs
Position
582185..583435
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AA seq
416 aa
AA seq
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MIKVLHFADAHIDLARQGRHDPQSGLPMRVLDFLKALDTIVDAAVEQKVDLVIFAGDAYR
DRTPAPTYQREWGRRIMRLSSAGIMTLLVIGNHDVSPASGRAHALQEFDTLQVPNVRVIS
KPCLLGPDDLNGLPLQVIGIPWLNRSAFAASLDNEKQSNESLNDQIERELTALVESLMDQ
LDPKLPAILTAHATVQGAFYGSERTIMLGADFVLPGSLVRDPRLDYVALGHIHNHQDLNK
DGHPHIVYPGSIERVDFGEAEEQKIFVTAEIERGHAEMQEHLLRGRKFFDHVAKLENPET
VNQDILKAFPGEKQLADAIFRLVVYYPREWDALIDESDIRRKAESAFEFHFIRRPQIQAR
IRLPQDKSVSEIPPIEVLNRYWDVIPAKGRDTQALNKLAEDIFETAQRGQSEKEAG
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgattaaagtgctgcatttcgcggacgcgcacattgatttggcccgtcagggccgccac
gacccgcaaagcggtctgccgatgcgcgtactggattttctcaaagcgctggataccata
gtggacgccgcggtcgaacagaaagtcgacctggtgatcttcgccggggacgcctaccgc
gaccgcacccccgcgcccacttaccaacgcgaatggggccggcgcatcatgcgcctgtcc
tcggcgggcattatgaccctgctggtgatcggcaaccacgacgtttcgcccgcttccggg
cgcgcgcatgcactgcaggaattcgacactctgcaggttcccaacgtgcgcgtaatcagc
aaaccctgtctgctggggccggatgacctgaacggtctgccgctgcaggtgatcggcatt
ccctggctgaaccgctcggcttttgccgccagccttgataacgagaagcaatccaacgaa
agtttaaatgaccagatcgagcgcgagttgaccgctctggttgaaagtctcatggaccaa
ttggatccgaaattgcctgccatcctgacagcgcatgccaccgtacagggcgctttctac
ggcagcgaacgcaccattatgctgggcgccgatttcgtgctgcccggttcgctggtgcgc
gatccgcgcctggattacgtggcgcttggccacatccataatcaccaggacctcaacaag
gacggccacccgcacattgtctatcccggctcgatcgagcgcgtggattttggcgaggcc
gaggaacagaaaatcttcgtcacggcagagatcgagcggggccatgccgaaatgcaagaa
cacctgctgcgtggaaggaaattctttgaccatgtcgctaagctggaaaaccccgaaacg
gtcaaccaggatattcttaaagcattcccgggcgaaaaacagttggctgacgccatcttt
cgcctggtggtttattacccgcgcgagtgggacgcgctgatcgacgagagcgatatccgc
cgcaaagcggaaagcgccttcgaattccacttcatccgccgcccgcagatccaggcgcgc
atccgcttgccgcaggataagagcgtcagcgagatcccgcccatcgaggtgctcaaccgc
tattgggacgtcataccggctaaaggccgcgatacgcaagccctcaataagttggccgag
gacatcttcgaaacagcccagcgcggccaatctgagaaagaggcgggatga
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