Pelolinea submarina: Pelsub_P0533
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Entry
Pelsub_P0533 CDS
T05783
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
psub
Pelolinea submarina
Brite
KEGG Orthology (KO) [BR:
psub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psub03400
]
Pelsub_P0533
DNA repair and recombination proteins [BR:
psub03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Pelsub_P0533
Archaeal homologous recombinant proteins
Pelsub_P0533
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_15
Rad50_zn_hook
AAA_29
SbcC_Walker_B
AAA_27
AAA_21
TMF_DNA_bd
DUF2730
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
BBB47306
LinkDB
All DBs
Position
583432..585996
Genome browser
AA seq
854 aa
AA seq
DB search
MIPIRLTLENFLSYRGEVQIDFSRVNVACISGPNGAGKSSIFDAITWVLFGRARRNEDDA
LISLGLESCKVTLEMDYESNRYRIQRSRERGKSTTLELQVRSEAEEWKAMTESGVRATEA
RIREILHLDYDTFINTSFFLQGKADMFAQQTPAHRKEILSSILGLEIWEAYREEAYRRRR
AGDTEQYARQNLLNEILVELEGEQDLTEKLELLDNSLKKTEALRGQKETLWNQAQAQLRQ
LKSDQEKLDLVNKQLDANRARAASQREQIGARGAELAAFEDTLKNETAIRLAYQTWQDTR
AEVERWNALAEQYHQLQSERGQAAAQIQTEEARLRQELAGLEMAQKEVDELLPKVAPLQK
QVEKDQIRLKELEKTLGELPRIEDQIAQLQKESTALGAENLHLKENMAELKANIEQLEAA
SGTQCPLCGQELSDAHRRAILEQLKAEGKTLGDQYRENNRLIKDNDAQQHKLQDQLTELR
RAQNEMSALQGQAGRNEQMLAGFQKQVEKWERQDQPRSTEIQAALKEEAFSKPQRVQLQQ
ADASLEKLSYQPEEHERRRQAEMDARSAEETFRNLEKARTAVESLRREIETLTTAANALD
EEITHGQQQLTELESNISGQKAQLPDAQAVETELEDLRHEENSLRRQVGAAQQMVSVLDK
QRERKVELTREIAEIQGQIAHLKTLETAFGRDGIQALLIEQALPEIELQANDILDRLTSG
RMSVTFMTEREYKDKKRDDKKQTLDILISDSSGQREYELFSGGEAFRINFAIRLALSRVL
AQRAGARLQTLVIDEGFGSQDEEGRQRLIEAIHLVGEDFAKILVITHLDELKDAFPSRIE
VQKTSGGSMVEVIP
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgatacccattcggctgacactggaaaacttcctctcctatcgcggcgaggttcaaatc
gatttttcgcgcgtaaacgtggcttgtatttcagggccgaacggcgcgggcaagtcctct
attttcgacgccattacctgggtgctgttcggcagggcgcgccgcaacgaagacgatgcg
ctcatcagcctgggtttggagagttgtaaagtaaccttggaaatggattacgaaagcaac
cgctaccgcatccagcgcagtcgcgaacgaggcaaaagcaccacgctggaattgcaggtg
cgcagcgaagccgaagaatggaaagccatgactgagtccggcgtgcgcgccaccgaggcg
cgcatccgcgagattttgcatctggattacgacacttttattaacacttcctttttcctg
cagggcaaggccgatatgtttgcccagcagacgcccgctcaccgcaaagaaatcctgagc
agtatcctgggattggaaatttgggaggcttaccgtgaagaggcataccgccgccggcgc
gccggcgacaccgaacagtacgcccgccagaacctgctcaatgaaattctggtcgaactg
gaaggcgagcaggacttaactgaaaaattggagctgctggataacagcctgaagaaaacc
gaagcattgcgcggacaaaaagaaacgctgtggaaccaggctcaagcccaactgcgccaa
ttgaaatcggaccaggagaaattggatctggtgaacaagcagttggatgccaaccgggcg
cgggctgcctcccaacgggaacagatcggtgcgcgcggggcggaattggcagccttcgaa
gacactttgaagaatgagacagccatccggctggcttaccagacctggcaggacacacgc
gcggaagtggagcggtggaatgccctggcggaacagtatcaccagctgcaaagcgagcgc
ggacaggccgcagctcagattcaaactgaggaagcccgcttgcgccaggagctggccggt
ttggaaatggcgcaaaaggaagtggatgaactgctgcccaaagtagcgccactgcagaaa
caggtggagaaagaccagatccgcttgaaagaactggaaaagacattgggcgaactgccg
cgcattgaagatcagatcgcgcaattgcagaaagaaagcaccgctcttggcgcggaaaat
ctacatttaaaagaaaacatggccgagttgaaggccaacattgaacagctggaagccgcc
agcgggacgcagtgcccgttgtgtgggcaggaactttcggacgcgcaccggcgcgccatc
ctggaacagttgaaagccgagggcaaaaccctgggcgaccagtaccgtgagaacaaccgc
ctgatcaaagacaacgacgcccaacagcacaagcttcaggatcaattaactgaactgcgc
cgcgcgcaaaatgagatgagcgcgctgcaggggcaggccggccgcaatgaacagatgctg
gccgggttccaaaagcaagtggaaaaatgggagcgtcaggatcagccgcgttcgacggag
attcaagctgcgttgaaggaagaggccttctcaaaaccccagcgcgtgcagctgcagcag
gcggatgcctcgcttgaaaaattgagctaccagccggaagagcacgagcgccgccgccag
gctgagatggatgcgcgcagcgctgaagaaactttccgcaacctggaaaaagcacgcacc
gcggtggaatcgctgcggcgtgagatcgaaacactcaccacagccgctaatgctttggac
gaagagatcacgcacggccaacagcagctgacagaattggaaagtaacatcagcgggcag
aaagcgcagctgcccgacgctcaggcggtggaaaccgaactggaagacctgcgtcacgag
gaaaactccctgcgccggcaggtaggcgctgcccagcagatggtatctgtgctggacaaa
cagcgtgagcgcaaagtcgaacttacccgcgagatcgccgaaatccaggggcagatcgcc
cacctgaaaacactggaaacagccttcgggcgcgacggtattcaggctttgttaattgaa
caggctttaccggaaattgaattgcaggccaacgacatcctcgaccgcctgaccagcggg
cgcatgtcggtgaccttcatgacggagcgcgagtataaggataagaagcgcgacgataaa
aagcaaaccctggatatcctcatcagcgattcttccggtcagcgcgaatacgagctgttc
tccggcggtgaggctttccgcatcaatttcgccatccggctggccttgtcgcgcgtgctg
gcccagcgtgccggagcgcgcctgcaaacgctggtgatcgacgaagggtttggcagccag
gatgaagaaggccgccagcgcttaatcgaagccattcacctggtcggtgaggattttgct
aaaatactggtaatcacccatctggatgagttgaaggacgcttttccttcccgcattgaa
gttcaaaagacatctggaggatccatggttgaggttattccctga
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