Pelolinea submarina: Pelsub_P1093
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Entry
Pelsub_P1093 CDS
T05783
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
psub
Pelolinea submarina
Pathway
psub03030
DNA replication
psub03410
Base excision repair
psub03420
Nucleotide excision repair
psub03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Pelsub_P1093
03410 Base excision repair
Pelsub_P1093
03420 Nucleotide excision repair
Pelsub_P1093
03440 Homologous recombination
Pelsub_P1093
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psub03032
]
Pelsub_P1093
03400 DNA repair and recombination proteins [BR:
psub03400
]
Pelsub_P1093
Enzymes [BR:
psub01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Pelsub_P1093
DNA replication proteins [BR:
psub03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Pelsub_P1093
DNA repair and recombination proteins [BR:
psub03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Pelsub_P1093
NER (nucleotide excision repair)
GGR (global genome repair) factors
Pelsub_P1093
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
Vip3A_N
HHH_2
HHH
Motif
Other DBs
NCBI-ProteinID:
BBB47865
LinkDB
All DBs
Position
1265863..1268904
Genome browser
AA seq
1013 aa
AA seq
DB search
MKKGRDIIKSSINLFQVFFVAAELAGVDEPNGTPGLAPPFLVHHVDALRQFMSLSLKRMS
ASVLQFRSQKPNEIRRRRSGIVKSLREVSMPKTLYLIDGHALAYRAYFALLTSGSRFQSS
TGEPTAATFGFINILLSILEKDRPDYLAVAFDTGKTFRNDRYPEYKATREKMPDELKMQI
ERIRELVDAFRFPRLEMEGYEADDVLGSVAKNAAEQGLGVKIITGDRDLLQLVTDRVVVN
LAGGKFSDAQDFFPEDVVKKMGVKPSQVVDLKALIGDTSDNIPGVKGVGQKTAEALLEKY
PTLDDIYAHLDEISGKANKLLAEGKDSAYLSYDLARIHTDLNVPLDLEMARTDNLDVPRI
TELFQELQFRTLTSRLEALLNKGVIGSEEQLALFGEEPVKLGLPPKYELNVTVVDTQVKL
DQLASDLKKARQISFDTETTSTDPMRADLVGISLATEIGSAYYIPVGHVGNSPQLPVGKI
VDAIRPAFTDPAIPKIGHNLKYDCLILRNVGIQVAPLSFDTMIAAWVVEPDSRRLGLKAM
AETELHTSMTHIEELIGKGSKQLTMDMVAVEDVAPYAGADAEIPLRLMPILKERLEKQTL
MEIFKNIEMPLIPVLIDMEFTGIAVDVDFFKQFSQELSQRLVEIQKEVYKAVGYDFNLNS
TQQLSKVLFETLGLTPPDSSNKTKSGHFSTAAGVLDEMRDQHIVVQLLLEYRELSKLVST
YLDALPKQVNPRTGRVHTSFSQTGSVTGRLASSDPNLQNIPTRTELGNKVRRGFVAAPGS
LLLSVDYSQIELRIAAHMANDKAMLAAFRAGQDIHAATAAAIYRVPLDEVTKDQRRHAKA
INFGLIYGMGPFGLTRTTDLTLAEAENFVKAYYEMFPGVKHFLDGIRKQAAEQGYVETML
GRRRYFPELRNPPNRQIQARAEREAINAPIQGTAADILKVAMINLPPELKKANLRAKMLL
QVHDELLLECTREELQKTVEVVKTVMESAYSLSIPLETDAAWGSNWGELKEEH
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaagggaagagatattattaaaagctcaataaatctgttccaggtatttttcgtc
gccgctgagctggcaggcgttgatgaacccaacggcacccctggcctggctccaccattc
cttgtccaccacgttgatgctttgcggcagttcatgtccttatcgctcaagcgcatgtcc
gccagcgttctccaatttaggtcccaaaagccaaatgaaattcgccgccggcggagcggc
atagtaaaatcattaagagaggtgtctatgcccaagactttatatttgattgacggccac
gcgttggcttatcgtgcttacttcgccctgctgaccagcgggtcgcgttttcagtccagt
acaggtgagcccaccgcggctaccttcggctttatcaatatcctgctcagtatcctggaa
aaagaccgaccggattatctggcagtagctttcgacaccggcaagactttccgcaatgac
cgctatccggagtacaaagctacacgtgagaagatgccggatgaattaaagatgcagatc
gagcgtatccgcgaattggtagacgctttccgtttcccgcgtctggagatggaggggtat
gaggccgacgacgtgctgggttcggtggccaaaaatgccgctgaacagggattaggtgtc
aaaattatcaccggcgaccgcgacttgctgcagttggtgaccgaccgcgtggtggtgaac
ctggccggcggaaaattctcggacgcgcaggatttcttccctgaagatgtggtcaagaag
atgggcgtaaaacccagccaggtggtggacttgaaagccctgatcggggatacatccgat
aatatcccgggtgtcaaaggcgtcggccagaagacggccgaagccctgctggaaaaatac
ccgaccctggatgacatttacgctcacctggatgagatcagcggaaaggccaataaattg
ctggcggaaggcaaggacagcgcttatctcagctatgacctggcccgcatccataccgat
ctgaacgttccgctggacttggagatggcgcgtacggataacctggacgtgcccaggatc
accgaattgttccaggaattgcaattccgcacgctcacctcgcgcctggaagccctgtta
aacaagggcgtgattggcagcgaagaacagttggctttattcggcgaagaaccggtcaag
ctgggactgccgcccaaatatgagttgaatgtcactgtggtggatacacaggtgaaactg
gatcaattagcgtccgacctcaagaaggccaggcaaatctcctttgacaccgaaacgacc
tccaccgaccccatgcgcgcggatctggtgggtatctcgctggcgactgaaatcggcagc
gcctactacatcccggtagggcatgtgggcaacagcccgcagctgccggttggaaaaatt
gtggatgccatccgtccggctttcaccgacccggccattcctaagattggccataacctc
aaatatgattgcctgatcttgcgcaacgttggcattcaggttgccccgttgagctttgac
accatgatcgcggcctgggtagtggaaccggacagccgccgcctagggttgaaggccatg
gcggagaccgaactgcataccagcatgacgcacattgaagaattaatcggcaaaggcagc
aagcagctgaccatggacatggtagcggtggaggatgttgcgccttacgccggcgcggac
gccgaaattccactgcgcctgatgcccatcctgaaggaacgcctggaaaagcagaccttg
atggagatatttaagaatattgaaatgccgctcatcccggtattgatagatatggaattt
accggcattgccgtagatgtggatttctttaaacaattctcccaagaattaagccagcgt
cttgtggaaatccagaaagaggtctacaaggcagtcggttatgatttcaacctgaattcc
acccagcagctttccaaagtgctttttgaaacgctcggattaaccccgccggattccagc
aataaaaccaagagcgggcatttttcgaccgccgcgggtgttttggacgaaatgcgcgac
cagcacatcgtggtgcagctattactggaatatcgcgagctttccaagctggtttctacc
tatttggacgcgctgcccaaacaggtcaacccgcgcaccggacgggtacatacctcattc
agccaaaccggttcggttaccggccgcctggcttcctccgaccccaacctgcagaacatt
cccacccgcaccgagttgggcaacaaggtgcgcagaggcttcgtagccgcacccggcagc
ctgctgctttcggtggattattcgcaaatcgagctgcgcatcgcggctcacatggccaat
gataaagccatgctggcggctttccgcgccgggcaggacattcacgcggctacggctgct
gcaatttacagagtccctctggatgaggtcaccaaagaccaacgccggcatgccaaggcc
atcaacttcggcctgatttacggcatgggccccttcgggctgacgcgcaccaccgatctg
acattggcggaggcggagaacttcgtcaaagcctattatgaaatgttcccgggcgtgaag
cacttcctggacggcatccgtaaacaagcagctgaacagggctacgtggagaccatgctg
ggacggcggcgctacttccccgaactgcgcaacccgcccaaccggcagatccaggcgcgc
gctgaacgcgaggctatcaacgcgcccatccagggcacggcggccgacatcctcaaggtg
gccatgatcaacctgccgccggagttgaaaaaggccaacctgcgtgccaagatgctgctg
caagtgcacgatgaattgctgttggaatgcacgcgcgaagagttgcagaaaactgtggaa
gtggtcaagacggtaatggagagcgcttattcgctttcgatcccgctggaaaccgacgcg
gcctggggcagcaactggggcgagctaaaagaagaacattag
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