Pelolinea submarina: Pelsub_P1157
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Entry
Pelsub_P1157 CDS
T05783
Name
(GenBank) DNA helicase II/ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
psub
Pelolinea submarina
Pathway
psub03420
Nucleotide excision repair
psub03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Pelsub_P1157
03430 Mismatch repair
Pelsub_P1157
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psub03400
]
Pelsub_P1157
Enzymes [BR:
psub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Pelsub_P1157
DNA repair and recombination proteins [BR:
psub03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Pelsub_P1157
MMR (mismatch excision repair)
Other MMR factors
Pelsub_P1157
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
Viral_helicase1
UvrD_C
AAA_30
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
BBB47929
LinkDB
All DBs
Position
complement(1336207..1337898)
Genome browser
AA seq
563 aa
AA seq
DB search
MTENNPFENQAEQRKEYLDKILQSDNPRKLIVAGPGTGKTYTFGAIFNKKVGKRNLALSF
IRKLVEDMENDLGNRAEVRTFHAFCKKLLHKRNGRIELIPFLTKIVESDANFLGNKLSDF
DEKFQMLDEDSPELTFYLERGDYYNAVSFNDTVYRLYKHVRDGHLELPTYDQIVVDEYQD
FNPLEVALIEELEKKSPILIVGDDDQAVYSGRNSSPAHLRAKYESGEYQVFQLPFCSRCP
RVVVEATTAFIKNVTDNGGLQDRIERPFFPYLEDKDYENSTYPKIVKATTSTISCLSKFI
AGEIKKIPEIEIKDAHEKNYPCVLLVGKRQYLNPLAKKLGEFYANINFSEAQDYNYSICD
AYDMLLHDDDSNLGWRILAEFEFNKVQIQDFIKSSLDGTPFNKILPEEFICKHLKVVNII
RAGKPSEQDRQALIGLIGEKSDQILGHFYGEQKEKQETDLSQPTILLSSFEGCKGLSAGH
VFIVGLNEGIVPKIDSNGNVDNIEYCKFVVALTRTLKRCYLLSNKWDYNPNDREPYLPSQ
FTQIIPGEFIEDRGYLTSKDITQ
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaaataatccatttgaaaaccaggcagaacaaagaaaagagtatcttgataaa
atcttacaatctgacaatccacgaaaattaattgtcgcaggacccggaacaggaaaaaca
tatactttcggtgcgatatttaataaaaaagtggggaaaagaaatcttgctctttcattc
ataagaaagcttgttgaagatatggaaaatgatctgggtaatcgagctgaagttagaaca
ttccatgcattctgtaagaaactactccacaaaaggaatggcaggatcgagctcatccca
tttctaacaaaaatagtagaaagcgacgccaatttcctcggaaataaactttccgatttt
gatgagaaatttcaaatgcttgatgaagattcgcctgaattaacgttttatcttgaaagg
ggagattactataatgcagtatcttttaatgacactgtctataggttatataaacacgtc
cgtgacgggcatttagagttgccaacttatgatcaaattgttgttgatgaataccaagat
ttcaatccgcttgaagttgcgttgattgaagaattagaaaagaaaagtcccatattaatt
gtcggtgatgatgatcaagcagtatattctggaaggaattcttcccctgcccacttgcga
gctaaatatgaatccggtgaatatcaagtttttcaattaccattttgttccaggtgtcca
cgagttgttgtagaagcaaccactgcatttattaaaaatgtaacagataatggtggtctt
caagatagaattgaaaggcctttctttccctatcttgaagataaagattatgaaaatagt
acatatccaaaaattgtgaaagcaacaacctcaacaataagttgtttgtctaagtttatc
gcaggagaaattaaaaaaatcccagaaatagaaattaaagatgcacacgaaaaaaactat
ccctgtgttctacttgttggaaagaggcaataccttaatcctttagcaaaaaaattggga
gaattttacgcaaatataaacttttctgaagcccaagattataattattccatatgtgat
gcatatgacatgcttctccatgatgacgattcaaatttaggttggcgaattcttgctgag
tttgaatttaataaagttcagatacaagactttatcaaatcttctctcgatggaacacct
tttaataagatactaccggaagaatttatttgcaaacatttaaaagtcgtcaatatcatc
agggctggtaaaccaagtgagcaagatcgtcaagcattaataggtcttataggtgaaaaa
agtgatcaaatcttagggcacttttatggagaacaaaaagaaaagcaggaaactgattta
tcccaaccgacaatacttttatcatcttttgaaggttgtaaaggtctttcagcaggtcac
gtatttatcgtcggtttaaatgaaggtatagtaccaaaaatagatagtaacggcaatgtc
gataatattgaatattgcaaatttgtggtggcattgactcgtactttgaagagatgttat
ttactttcgaataaatgggattacaatccaaatgatagggaaccatatttaccatctcaa
tttacgcaaataattccaggagaatttatagaggatagaggatacctaacaagcaaagat
ataactcaataa
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