Pelolinea submarina: Pelsub_P1503
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Entry
Pelsub_P1503 CDS
T05783
Name
(GenBank) ribonucrease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
psub
Pelolinea submarina
Pathway
psub03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psub00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Pelsub_P1503
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psub03019
]
Pelsub_P1503
Messenger RNA biogenesis [BR:
psub03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Pelsub_P1503
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
Spem1
KH_2
Motif
Other DBs
NCBI-ProteinID:
BBB48275
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Position
1762707..1764227
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AA seq
506 aa
AA seq
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MNTGITIAICVAAVLILSFVGGQMIARMLRKSEREKTEQMLQEAKEKAKVIELEARDTAL
KIKQDSESEISRRRNELSHEDERLQKRRAELDTRIERLEQREAQVNKRQSSVDRRANEIE
KLYSDQMEKLQEVSHMTVEEAKQELLNEVEKEARADMARIVRQIEAEARQEGDKRARELI
TETIQRVASDQVAQVTTSTVSLPNEEMKGRIVGRNGRNIRAFEQAAGVDVIVDDTPEAVT
ISCFDPTRREIARRSLERLISDGRIHPAHIEKILAEEEKEVQRVIEQAGEQAAFDAGVAG
LPLDVLRMLGRLKFRTSYGQNQLTHAVETAMISGLLAVEIGADTEVAKAAGLLHDIGKAM
DHNTEGTHAVIGAEFCRRYRVNPAVINAIESHHHETEQQSLEAVIVESADAISGARPGAR
RENLEQYVKRLRALEEMAHSYKGVSQAYAIQAGREVRIIVKPETVDDFESTRMAREIAKN
IEETMQYPGQIKVTVIREMRAVEFAK
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgaatacaggtatcaccattgccatctgtgttgcagctgtcctgattctatctttcgtc
gggggacagatgatcgcgcgcatgctgcgaaaatctgaacgagaaaagacagaacagatg
ctgcaagaagcaaaagaaaaagctaaggttatagaactcgaagcgcgcgatacagccctc
aaaatcaaacaggacagtgaaagtgagatcagccgccggcgtaatgaattatcgcatgag
gatgaacgtttgcagaaacgccgggcggaattggacacgcgcattgagcgcctggaacaa
cgtgaagcccaggtcaataaacgacaaagttcggtggatcggcgtgccaacgagatcgaa
aagttgtattccgatcagatggagaagctgcaagaagtctctcatatgaccgtagaagaa
gccaagcaagagcttttaaacgaagtggaaaaagaagcccgcgcggatatggcgcgcatc
gtccgccagatcgaagcggaagcccgccaggaaggcgacaagcgcgcccgcgagctgatc
accgaaaccatccaacgggtggcttccgaccaggttgcccaggtaaccacctccaccgtc
tccctgcccaatgaagaaatgaaaggccgcatcgtcggccgcaacggccgcaacattcgc
gcctttgaacaggctgccggtgtggacgtcattgtggacgacacccccgaagccgtgacc
atttcctgctttgaccccacccgccgcgagatcgcgcgccgttcactggaacgcctgatc
tccgacggccgtattcatccggcgcacattgaaaaaatcctggctgaagaagagaaagaa
gttcagcgtgtgattgagcaggccggcgaacaggccgccttcgacgcgggtgtggccggg
ctgcctttggatgtgctgcgcatgttgggccgcttgaaattccgcacctcgtacggccag
aaccagttgacccatgccgtggaaacggccatgatttccggtttgttggccgtggaaatc
ggcgcggatacggaagtagccaaggctgccggtttgctgcacgatatcggtaaagccatg
gatcacaacacggaaggcacgcacgcggtcatcggcgcggaattctgccgtcgttatcgc
gtcaacccggctgtcatcaatgctattgaatcccaccaccacgaaaccgagcaacagtcg
ctggaagccgtgatcgtggaatcagccgatgccatctccggcgcccgccccggcgcccgc
cgcgagaatttggagcagtacgtcaaacgcctgcgcgcgttagaagaaatggcgcattct
tacaaaggcgtcagccaggcatatgccatccaggccggccgtgaagtgcgtatcatcgtc
aaaccggaaactgtggacgattttgaatccacccgtatggcgcgtgagattgccaagaat
attgaagagaccatgcaatatcccggtcaaatcaaagtcacggtcatccgcgaaatgcgt
gcggtggaattcgcgaagtaa
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