Pelolinea submarina: Pelsub_P1603
Help
Entry
Pelsub_P1603 CDS
T05783
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
psub
Pelolinea submarina
Brite
KEGG Orthology (KO) [BR:
psub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psub03016
]
Pelsub_P1603
Enzymes [BR:
psub01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Pelsub_P1603
Transfer RNA biogenesis [BR:
psub03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Pelsub_P1603
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
BBB48375
LinkDB
All DBs
Position
complement(1882675..1883262)
Genome browser
AA seq
195 aa
AA seq
DB search
MKSATLRTFFACNISDTNLSHINKLLSELKSSTPNAVKWVDPKNLHLTVKFIGEFRQTDI
ESIKPLLSNALSDFSSFPVTIQTLGAFPSFGKPQVIWLGLDGNHALFRLVEIVEKQCAVL
NYPTESRPFSAHITIGRLRQSASPTERGIIGDVLRTHHSVTIGAQPIEALHFYKSDLTPS
GPIYQTLFTIPFTSR
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcagccacattgcgcaccttcttcgcctgcaatatttcagataccaatttatcc
catattaataaattactctccgagttaaaatcctcaacacccaatgcggtgaaatgggtt
gatccgaagaacctgcaccttacggttaaattcatcggcgaattcaggcaaaccgacatt
gaaagcatcaaacctttactgagcaatgctttatctgatttctcttccttccccgtcacg
atccaaaccttaggcgctttcccttcctttgggaaacctcaggtcatctggttgggtttg
gacgggaaccatgctttgtttaggttggtagaaatcgtggaaaagcaatgcgcggttttg
aattatccaaccgagagccggccattttccgcgcacattacaatcggcaggttgaggcaa
tccgcctcaccaactgaaaggggaataatcggggatgttttacgtacgcatcattctgtt
accattggtgcacaacccattgaagcccttcatttttataagagtgatttaaccccgagc
ggtcccatttatcaaaccctgtttacaatcccttttacctcacgatag
DBGET
integrated database retrieval system
