Pelolinea submarina: Pelsub_P2465
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Entry
Pelsub_P2465 CDS
T05783
Name
(GenBank) tRNA pseudouridine38-40 synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
psub
Pelolinea submarina
Brite
KEGG Orthology (KO) [BR:
psub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psub03016
]
Pelsub_P2465
Enzymes [BR:
psub01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Pelsub_P2465
Transfer RNA biogenesis [BR:
psub03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Pelsub_P2465
Prokaryotic type
Pelsub_P2465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
BBB49234
LinkDB
All DBs
Position
complement(2887611..2888351)
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AA seq
246 aa
AA seq
DB search
MALYQITIAYDGTDFCGFQRQAAARTVQNEIETALRRLGWNERSILSAGRTDSGVHASGQ
VVSFNLDWGHSQQKLLDALNDLLPNDIGVKDLSLAPEGFHPRYDARARRYRYQIYFNQVS
DPLIERYYWRVWPELDGKVLKKGAELFLGKHDFRAFGRPPNEKSTSLRTINALNWEFSED
GSQAAMTIVAQAFLYHMVRRIVFVLVRAGQGRISLSDVEGSIERQLDLPAGIAPAKGLIL
EEIIYQ
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atggcactttaccaaattacgatagcatacgacggcactgatttctgcggatttcagagg
caggcagctgcgcgtaccgttcagaatgaaatagagacggctctccgccgattaggttgg
aatgaacgttcaattctatcggcgggccggacagatagcggtgtgcatgcctccggccag
gtagtaagtttcaatctggattgggggcactcccagcaaaaattactggatgcgttgaac
gatttactgcccaatgacattggcgtgaaggacctttcgttagccccggaaggattccat
ccacgatatgatgccagggcgcgacgctaccgctaccagatttatttcaatcaggtcagc
gacccgctaattgaaaggtattactggcgagtttggcctgaattggatggaaaagttctg
aaaaaaggcgctgaactcttcctgggaaaacatgattttcgtgctttcggaaggccgccc
aatgaaaaatcaaccagcttgcgcaccatcaatgcgctcaactgggagttttctgaagac
ggtagtcaggcagccatgaccatcgtggcacaggctttcttgtatcacatggttcgtcgt
attgttttcgttttggtccgggcagggcagggccggatcagcctttcagatgtggaaggc
agtatagaaagacaattggatttacccgcggggatagcgcccgccaagggattaatttta
gaagaaataatatatcaataa
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