Pelolinea submarina: Pelsub_P2467
Help
Entry
Pelsub_P2467 CDS
T05783
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
psub
Pelolinea submarina
Pathway
psub03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
psub00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Pelsub_P2467
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psub03021
]
Pelsub_P2467
03400 DNA repair and recombination proteins [BR:
psub03400
]
Pelsub_P2467
Enzymes [BR:
psub01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Pelsub_P2467
Transcription machinery [BR:
psub03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Pelsub_P2467
DNA repair and recombination proteins [BR:
psub03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Pelsub_P2467
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
DUF2551
Motif
Other DBs
NCBI-ProteinID:
BBB49236
LinkDB
All DBs
Position
complement(2888760..2889737)
Genome browser
AA seq
325 aa
AA seq
DB search
MTVAQSSMVAPTLEREAEARNYAKFVISPLERGYGVTLGNSMRRVLLSSLEGAAVTSMRI
SDTLHEFSDIPGVREDVLQVMLQVKQLRIKMHEGEVSHMHLDVSGEGVVTAADIQTTAEI
EIVNPELYLFTVDDPKTQLSIDFTVERGRGYIPSDERIGELPIGELPVDAIFSPVKRVNF
DVGNARVGQSTNYDRLELEIWTDGTTTPEKALAQSGKILIEQFRLIAGVKEEMLEIVEEK
EETTNQISSETADMPIENLDLSVRVFNSLKRTGVTTVGDVIELLDKGEEAVMSIRNFGEK
SLDELRQKMQEKGFMKEENDESEVE
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgactgtggctcagagtagtatggttgcaccaacacttgaacgggaagctgaagcccgc
aattatgcaaagttcgtgatcagcccccttgagcggggatatggtgtcactttgggcaat
tcaatgcgcagagtgctgctttcctcattggagggcgctgcagttacatccatgcggatc
tcggatacgttgcatgagttcagtgatatcccaggcgttcgtgaggatgtcttgcaggtt
atgcttcaggtaaagcagctcagaattaaaatgcacgaaggagaagtttctcatatgcat
ttggatgtcagcggtgaaggtgttgttaccgcggctgacattcagacgactgctgaaatt
gaaattgtcaaccccgaactatatctgtttacggtagacgatcccaaaacacagctttct
attgactttacagttgaacgcggtcgcggatatattccttcggatgaacgcattggcgaa
ctgccaattggcgaacttcctgtggatgccatcttcagtccggtaaaacgtgtcaatttt
gacgtgggcaatgcgcgcgtgggtcaaagcaccaattacgaccggctcgagcttgaaatc
tggaccgatggaaccaccacgcctgagaaggcattggctcaatcgggaaaaatcctgatc
gaacagttccgtctcatcgccggcgtcaaagaagaaatgctcgagatcgttgaggaaaaa
gaagaaacaaccaatcagatcagcagcgaaacagctgatatgccgattgagaatttagac
ctttctgtacgtgtctttaactcattgaagcgtaccggcgttaccactgtaggtgatgtg
attgaattgctggacaagggcgaagaagccgtaatgtccatcaggaattttggtgagaag
agcctggatgagctgcgtcagaagatgcaggagaagggctttatgaaagaagaaaacgac
gaaagtgaagtggagtaa
DBGET
integrated database retrieval system
