Candidatus Planktophila sulfonica: A1sIA56_00100
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Entry
A1sIA56_00100 CDS
T05158
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
psuf
Candidatus Planktophila sulfonica
Brite
KEGG Orthology (KO) [BR:
psuf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psuf03032
]
A1sIA56_00100
03400 DNA repair and recombination proteins [BR:
psuf03400
]
A1sIA56_00100
Enzymes [BR:
psuf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
A1sIA56_00100
DNA replication proteins [BR:
psuf03032
]
Prokaryotic type
DNA Topoisomerases
A1sIA56_00100
DNA repair and recombination proteins [BR:
psuf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
A1sIA56_00100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
ASY15352
UniProt:
A0A249KEX9
LinkDB
All DBs
Position
21931..24693
Genome browser
AA seq
920 aa
AA seq
DB search
MAKDLKKLVIVESPAKARKIGGYLGDGFIVEASVGHIRDLPQRAADIPKEVKKLAWSKEG
VDIENDFAPLYVINPDKKAKVAELKELMKDAEEILLATDEDREGEAIAWHLVEVLQPKIP
IKRMVFNEITEEAIKAAVENTRDLDYNLIDAQETRRVLDRLYGYRLSPVLWKKVMPRISA
GRVQSVATRLIVEKERERMAFISSSWWDLNAKTELGFTARLLSVDGKKVASTADFGADGA
VKEKSLKDILLLDEKQATALTESLKNTPLTVKSMEESPRTERPKPPFTTSTMQQDAGSRL
GWGAQITMRIAQRLYENGYITYMRTDSINLSDQAIKAARAAATSLYGKDHVYETARLYQG
KSKNAQEAHEAIRPAGDVFKTPGELAPELSRDEFALYDLIWKRTVASQMADAKKMQMRVD
FDAQTADKKETIFRANGSVITFPGFLAAYDDIATDENKDEESEDRRLPAMTVGQSVKVDE
YSCEGHDTKPPARYTEPTLVKKLEELGIGRPSTFASIIQTIQDRGYVYKRGRALVPTFLA
FSVTGLLETHFTKLVDYDFTASMEEDLDKIASGEAGRVDWLRDFYYGVDGQPGLNELALD
LGVIDARATNTMNLSDTIEIRVGRYGAYLQENIPDQDRKLANIPENLAPDELTLEKAIEL
LAAPSGERELGVDPKTNFEVVAKSGRFGPYITEIFPEEPVELNDKGEPKKKRKKADAPKP
KTASLLSTMNLDTITLDDALKLLSLPRVLGTNSAGDEITVQNGRYGPYLKAGADSRTLTS
EDQLFSINLDEALEIYSKPKERRRGVAKPPLKELGVDPGSEKQVIIKDGRFGMYVTDSET
NATLRRGDTLEAMTLERGLELLAGRRAWEAENGPTPKKSRKKAAKVKPGDAAPTLTKNTV
KKAATKKKAAKKATGKAKKA
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagatctcaagaagctggtgatcgttgaatcaccagcgaaggcacgcaaaatt
ggcggctacctcggcgatggtttcatcgtcgaggctagcgtcggtcatattcgcgatctg
ccgcagcgcgcagctgatatccctaaagaggtaaagaagctcgcttggtccaaagaaggc
gtcgatatcgaaaatgatttcgcacctttatatgtcattaaccccgacaagaaggcgaaa
gttgccgagcttaaggagttgatgaaggacgctgaagagatccttcttgcaactgacgaa
gaccgcgaaggcgaagcaatcgcctggcacctcgttgaagtactacagccaaagattccc
attaagcgcatggtctttaacgagatcaccgaagaggcaatcaaggcagctgtcgaaaac
actcgcgaccttgattacaacctcattgatgcacaagaaacacgtcgtgtactagaccgt
ctctatggttaccgactttcaccagtattgtggaagaaagttatgccacgcatttcagca
gggcgcgttcaatctgttgccacacgcctcatcgttgaaaaagaacgcgaacgcatggcc
ttcatctcatcttcttggtgggatctcaatgcaaagacagagcttggctttactgcacga
ctgctttcagtagatggcaagaaagtagcctccaccgctgacttcggcgcagatggcgca
gttaaagagaagtcacttaaagacattctcttgcttgatgaaaagcaagcaacagctctt
actgaaagcttaaagaacacaccactgaccgttaagtcgatggaagaaagcccacgcacc
gaacgtcctaagccaccatttactacatcaacaatgcaacaggacgcgggttcacgactt
ggttggggcgcacaaatcactatgcgtattgcacaacgtttgtacgaaaacggttacatc
acctacatgcgtacagactcaatcaacttatctgatcaagcaatcaaagctgcacgcgcg
gccgcaacttcgctctacggaaaagatcacgtctacgaaaccgcgcgcctttaccaaggt
aaatctaagaacgcacaagaagcgcacgaagcaattcgcccagcaggagatgtcttcaag
acccctggtgaattagcacccgaactttcacgtgatgaattcgcactatatgacctcatc
tggaagcgcaccgttgcttcccaaatggctgatgccaagaagatgcagatgcgcgtcgac
ttcgatgcacaaaccgcagataagaaagagacaatcttccgtgccaacggttcagtcatt
accttcccaggttttttagctgcatacgatgacatcgcaactgatgaaaacaaggatgaa
gaatcagaagaccgtcgcttgcctgcaatgactgttggtcaatcagtaaaggtcgatgaa
tactcttgcgaaggccacgacaccaagccacctgcgcgttacaccgaaccaactctcgtt
aaaaagttagaagaactcggtatcggtcgcccttcaacattcgcatccatcattcaaacc
attcaagatcgcggctatgtctataaacgcggccgcgcacttgttccaaccttcctcgca
ttctcagtgacaggcttgcttgaaacccacttcaccaagcttgtggattacgacttcaca
gcctcaatggaagaagatctcgacaagattgcatccggtgaagcaggccgcgtcgattgg
ctgcgcgatttctactacggcgtcgatggccaaccaggacttaacgaactcgcactcgac
ctaggcgttattgatgcgcgcgccaccaacacaatgaatttatctgacaccatcgaaatc
cgcgttggtcgctacggtgcgtatctacaagagaacatccctgatcaagatcgcaagctc
gccaacattcctgaaaaccttgcacccgatgaactcactcttgagaaagcaatcgaactt
cttgcagctccatcaggtgaacgcgaactcggcgtagacccaaagacaaactttgaagtc
gttgcaaagtcaggacgcttcggcccatacatcactgaaatcttccctgaagaacctgtc
gaacttaacgataagggcgaaccaaagaagaagcgcaagaaagccgatgcaccaaaacca
aagacagcatccctgctttccaccatgaacctcgacaccatcacactcgatgatgcactc
aaactcttatctcttccgcgcgtacttggcaccaacagcgcaggagatgaaatcaccgtg
cagaacggccgctacggtccgtatctcaaggccggcgcagattcacgcacactcacatct
gaagaccaactcttttctattaacctcgatgaggcacttgagatttactcaaagccaaag
gaacgccgccgcggtgttgcaaagcctccactgaaagaactcggcgtggatccaggcagt
gaaaaacaagtcatcattaaagatggtcgcttcggtatgtatgtcaccgatagtgaaacc
aatgcaacgcttcgtcgcggtgacacgttagaggctatgactctcgaacgcggactcgaa
ctccttgcaggccgccgcgcatgggaagcagaaaacggcccaacacctaaaaagtcacgc
aaaaaggcagccaaggtaaagccaggagatgctgccccaactcttacaaagaacaccgta
aagaaagcagcaacaaagaagaaagccgccaagaaagccacaggaaaagcgaagaaggct
taa
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