Candidatus Planktophila sulfonica: A1sIA56_00780
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Entry
A1sIA56_00780 CDS
T05158
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
psuf
Candidatus Planktophila sulfonica
Pathway
psuf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psuf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
A1sIA56_00780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psuf03400
]
A1sIA56_00780
Enzymes [BR:
psuf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
A1sIA56_00780
DNA repair and recombination proteins [BR:
psuf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
A1sIA56_00780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Spectrin_SYNE1
PipA
TPR_MLP1_2
STX6_10_61_N
Motif
Other DBs
NCBI-ProteinID:
ASY15474
UniProt:
A0A249KFA9
LinkDB
All DBs
Position
complement(164874..165116)
Genome browser
AA seq
80 aa
AA seq
DB search
MATKDSQSGEIKPSYEEARDELAEIVESLEDGSATLEESLKLWERGEELAKICQEWLDGA
KKKLDAAKKPAKNSEAGEEQ
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atggccactaaagattcccagtccggcgaaatcaagccttcatacgaagaagcacgcgat
gaactcgctgaaattgttgaatcacttgaagatggcagcgcgaccttagaggaatcactc
aagctttgggaacgtggcgaagagttagcaaagatctgccaagagtggctcgatggcgca
aagaagaagttagatgctgcaaagaagccagctaagaactctgaggctggtgaggaacag
taa
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