Candidatus Planktophila sulfonica: A1sIA56_02520
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Entry
A1sIA56_02520 CDS
T05158
Name
(GenBank) deoxyribodipyrimidine photolyase-related protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
psuf
Candidatus Planktophila sulfonica
Brite
KEGG Orthology (KO) [BR:
psuf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psuf03400
]
A1sIA56_02520
Enzymes [BR:
psuf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
A1sIA56_02520
DNA repair and recombination proteins [BR:
psuf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
A1sIA56_02520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
LysR_substrate
Motif
Other DBs
NCBI-ProteinID:
ASY15794
UniProt:
A0A249KG79
LinkDB
All DBs
Position
complement(500786..502300)
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AA seq
504 aa
AA seq
DB search
MVTAQSKKTVLLLNDQLNRNYGALKKADPKTHQILFIESERMLTTRSWHIQRLFFLMSAR
DHFLQELRNEGFTVTFIQSANTEVGINDFRATHPGVEIEVTEPSSHQQFEQLKGLGLTLI
PNDFFLTSRPLFAQWANAQKSLVMENFYRAQRVRLNILMEGSDPVGGKWNYDADNRLPPP
KSAHTWPAYLEHPRDEIDAAVIAGIKKRKIPVFGDDPDTTWGTTRAAALKQMEHFFKTGF
AEFGAYEDAMVADSWAVNHSLLSPYLNVGLLHAEEVIAAALKRFAKGDIPIPSAEGFIRQ
IIGWREYINGLYWHFGDLYRNENALAASRPLLPLFTDSSKTEMKCVSTQVRDIEARAWVH
HIPRLMVLSNLALITGTSPQEFLDWMRRAFIDAADWVMVPNVIGMSLHADGGKLATKPYA
SGGSYISKMGSFCKGCAFDPKKRIGDDACPFTTLYWDFLDRNQERFAKNHRMGQQLAGLK
RLSDLPELRERAKEVLDLLSRGEL
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
ttggtaactgctcaatctaaaaagacagtacttcttcttaacgaccaactgaatcgcaat
tacggagcgctgaagaaagctgatccaaagacccatcagattctcttcatcgagagtgaa
cgcatgctcactactcgctcttggcatattcagcgcctcttctttctgatgtctgctcgc
gatcacttcctgcaagagctacgcaatgaaggatttacagtcactttcatccaaagcgct
aacactgaagtgggaatcaacgattttcgagcaactcatccaggcgttgagattgaagtt
accgaaccttcttcacatcaacagttcgaacagttaaagggcctcggactgacacttatc
cctaacgatttctttctgacatcccgcccactttttgcgcaatgggcaaatgcacagaag
agcttggtgatggagaacttctatcgtgcacaacgtgttcgcttgaatatcttgatggaa
ggcagtgaccctgtcggtggcaaatggaattacgacgccgataatcgtcttccgcctccc
aagagtgcacacacatggcccgcttatcttgaacacccacgcgatgaaatcgatgcggca
gtaattgcaggtattaagaagcgcaagattcctgtctttggcgatgatcccgatacaaca
tggggcacaactcgtgctgctgcacttaaacaaatggaacacttctttaagacaggtttt
gctgaattcggagcttatgaagatgcgatggttgctgattcctgggcggtcaatcactca
ctcttaagtccttatctcaatgttggattgctccatgctgaagaggtaattgctgcagcg
ctcaagcgctttgctaagggtgatattccgataccgagtgctgaaggatttattcgccaa
atcattggctggcgcgaatacatcaatggtctctattggcacttcggcgatctctatcgc
aatgaaaatgctttagctgcgtctcgcccactcttgcctctcttcacagattcgagcaaa
actgagatgaaatgcgtatcaactcaggtgcgagatatcgaagcacgcgcctgggttcat
cacattccacgtctgatggtcttaagtaatctcgcactcatcaccggaacctcaccacaa
gaattcttagattggatgcgccgagcatttatcgacgctgcagattgggtcatggttccc
aacgtgattggaatgagtttgcatgcagacggcggcaagttagctaccaaaccatatgca
tcaggtggttcatatatttctaagatgggaagtttctgcaagggatgcgcctttgatccc
aagaaacgcatcggtgatgacgcctgtccatttacaacgctgtactgggatttccttgat
cgcaatcaagaacgttttgcaaagaaccatcgcatgggccagcaattagccgggttgaaa
cgattgagtgatttaccggaattgcgagagcgcgcgaaagaagtgttagaccttctctct
cgtggtgaactctga
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