Candidatus Planktophila sulfonica: A1sIA56_02555
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Entry
A1sIA56_02555 CDS
T05158
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
psuf
Candidatus Planktophila sulfonica
Pathway
psuf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psuf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A1sIA56_02555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psuf03400
]
A1sIA56_02555
Enzymes [BR:
psuf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
A1sIA56_02555
DNA repair and recombination proteins [BR:
psuf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
A1sIA56_02555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
ASY15801
UniProt:
A0A249KG82
LinkDB
All DBs
Position
complement(508618..509490)
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AA seq
290 aa
AA seq
DB search
MSPAAKSPKKPRIGAHTPTSGGMAKRSIAYAELTQAEAIQVFTSNPRGWAMPETNHEADA
LFREKAEALDIETYVHAPFLINLGSPTEDTYKNSLASTAYSLKRGQEIGALGVVIHTGSA
VKEDNVDNAWKQIKKGVMPILEALDDDAPMLLLEPTAGQGQSLVKRLEDLENYLKALEYH
PKVGICLDTCHVFAAGHDIAKKGGMKETLDLLVQVAGIERIQLIHANDSMDVCGALKDRH
QNIGKGFIGVDPFAELLKHPAVANAPLILETPGMEPEHGEEIALLKQLRG
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgtctccagctgctaagtcaccaaaaaagccacgtatcggcgctcatactcctacttca
ggaggaatggctaagcgttccattgcatatgccgagttaacacaagctgaagcaattcaa
gtatttacatcgaatccacgcggatgggcgatgcctgagactaatcatgaagctgatgcg
ctctttcgcgaaaaggctgaggcgctcgatattgaaacttatgtgcacgcaccatttctc
attaacttaggttcgccaactgaagatacatataagaactcattggcatcgactgcttat
tcgcttaagcgcggccaagagattggcgcactcggagttgttattcacacaggatctgct
gtgaaggaagataacgtcgataacgcatggaagcagattaagaagggcgttatgcctatt
cttgaagcgctcgatgatgatgcaccaatgctcttgctggaacctactgctggacaaggt
caatcacttgtgaagcgcctagaagatttagagaactacttgaaagctctggaataccac
ccaaaggtcggcatctgtcttgatacctgtcacgtctttgcagcagggcacgacattgcc
aagaagggtggaatgaaggagaccctcgatcttctcgttcaagttgctggcatcgaacga
attcaacttatccatgccaatgattcaatggatgtctgtggcgcgcttaaagaccgccac
caaaatatcggtaagggctttatcggagtcgatccattcgcggaattgctgaagcatcct
gcggtagcgaatgctccacttattctcgaaactccaggaatggaacctgaacatggcgag
gaaatcgcacttctaaagcagctgcgtggatga
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