Candidatus Planktophila sulfonica: A1sIA56_03450
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Entry
A1sIA56_03450 CDS
T05158
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
psuf
Candidatus Planktophila sulfonica
Pathway
psuf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
psuf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A1sIA56_03450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psuf03021
]
A1sIA56_03450
03400 DNA repair and recombination proteins [BR:
psuf03400
]
A1sIA56_03450
Enzymes [BR:
psuf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A1sIA56_03450
Transcription machinery [BR:
psuf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
A1sIA56_03450
DNA repair and recombination proteins [BR:
psuf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
A1sIA56_03450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
ASY15966
UniProt:
A0A249KGU1
LinkDB
All DBs
Position
complement(696900..697160)
Genome browser
AA seq
86 aa
AA seq
DB search
MSAHMDGITNPPIDELLDKAGSKYSLVLYAAKRARQINAYYSQLGEGLLEYVGPLVDTHV
HEKPLSIALREINEGLLTIENLEPTA
NT seq
261 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcacatatggatggaatcacaaacccacctatcgacgaacttctcgataaggct
ggttctaagtacagcctcgttctctatgcagcaaagcgtgctcgccaaattaatgcgtac
tactcacaacttggtgaaggtcttcttgaatacgttgggccactagttgatacacacgtt
cacgagaagccattgtcaattgcacttcgcgaaatcaacgaaggtcttttgactattgaa
aatctagaaccaaccgcctaa
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