Candidatus Planktophila sulfonica: A1sIA56_04280
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Entry
A1sIA56_04280 CDS
T05158
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
psuf
Candidatus Planktophila sulfonica
Brite
KEGG Orthology (KO) [BR:
psuf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psuf03032
]
A1sIA56_04280
03036 Chromosome and associated proteins [BR:
psuf03036
]
A1sIA56_04280
03400 DNA repair and recombination proteins [BR:
psuf03400
]
A1sIA56_04280
DNA replication proteins [BR:
psuf03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
A1sIA56_04280
Chromosome and associated proteins [BR:
psuf03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
A1sIA56_04280
DNA repair and recombination proteins [BR:
psuf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
A1sIA56_04280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
DUF3656
HU-HIG
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
ASY16118
UniProt:
A0A249KH32
LinkDB
All DBs
Position
complement(858140..858610)
Genome browser
AA seq
156 aa
AA seq
DB search
MNKAQFIAALAPHFNGSKKEAAHAVDIVFDTIVRNMSAGNDVMINDFGKFKKVDRKARMG
RNPFTGETIKIKASKKARFLPAKALKEVIAGDRKLGPAPKPEVKPAPKAAVKPAAKKVAK
KAPAKKKTAAKKVAKKAPAKKKPAAKKVVKKAAKKR
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atgaataaggcccagttcatcgctgcgttggccccacacttcaacggcagcaagaaagaa
gcagctcacgctgtagatatcgtttttgacacaatcgttcgtaacatgtcagctggaaac
gatgtcatgatcaacgacttcggtaagttcaagaaggttgaccgcaaggcacgtatggga
cgtaacccattcactggcgagacaatcaagatcaaggcttcaaagaaggctcgcttcctc
cctgcaaaggcactcaaggaagttatcgctggcgatcgcaagctcggcccagcaccaaag
ccagaagtaaagccagctccaaaggctgctgtaaagccagctgctaagaaggttgctaag
aaggctccagcaaagaagaagacagctgcaaagaaggttgctaagaaggctccagcaaag
aagaagccagcagctaagaaggtagttaagaaggctgcaaagaagcgttaa
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integrated database retrieval system
