Candidatus Planktophila sulfonica: A1sIA56_04640
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Entry
A1sIA56_04640 CDS
T05158
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
psuf
Candidatus Planktophila sulfonica
Pathway
psuf00550
Peptidoglycan biosynthesis
psuf01100
Metabolic pathways
psuf01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
psuf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
A1sIA56_04640
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
A1sIA56_04640
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psuf01011
]
A1sIA56_04640
Enzymes [BR:
psuf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
A1sIA56_04640
Peptidoglycan biosynthesis and degradation proteins [BR:
psuf01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
A1sIA56_04640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
ASY16188
UniProt:
A0A249KH99
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All DBs
Position
complement(930954..933116)
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AA seq
720 aa
AA seq
DB search
MNQRSRLNLLVIQIFIASLMFALFGRLFYLQVAAGPKYRDAALSIQSRDVVTPANRGFIV
DSSGVPMALNKVGLAVTVDRTKIDKLPDKGVAVVQDLVNLLGLNFDDVWQRTRLCGELPK
GKKAGCWTGSRFQPIPITKTADPQLALRIVERSDRYPGISATPLAIRSYPTTLGLNGGHV
LGYVGPLTEADLAGANGRSYFRSESIGKAGLETVYDEYLRGVPGIKTFIVDRKEAVTTTS
KNTKPTAGNHLVTSLDIRLQAAAEAALAGAVKRARGSGFRADGGAAVVLDVRNGQVLALA
SYPTFDPNAFEKGLSVQEANDLYSESNGVPALNRALQGLYAPASTFKSVSIIAAKDAGYD
LNASYACPSEVQVGTRAFQNFESKAQGTLSMKKALAVSCDTIWYRIAYDEWLRDGGLKPK
SNPNDYFFKAAAKFKVGEKTGVDLPSESAGRLADREWRKDWYSQNKDFYCNYKTRATKAQ
QTPFLLQLARENCIDGDKIRAGDAVNFSIGQGDTVVTPIKLAQMYAAIANGGTIWKPTIA
KAIVKTDGTVLRTFKPEKLGDLGVDQETLVFLRDALREVTISGTAAGAFSGFPVATAGKT
GTAQVFGRNANGSAKADTSWYASFAPAKNPRYAVVMMVSQGGYGSGTSGVGVRQIYETIF
GAQGSTVKPELALFPAGKPPTKLPRISPATKPKPSILNPGKPKAVASATPAAKVKVKAKR
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaacgttctcgactcaaccttctcgttatccaaatctttatcgcatctctgatg
ttcgctctcttcggccgtctcttctatcttcaagtagccgcaggtcctaaatatcgcgat
gcagcgctcagcattcaaagccgcgatgttgtgacgccggcaaaccgtggatttatcgtt
gattcttcaggtgtcccgatggccctcaataaagtggggctcgccgtcacagtagaccgt
accaaaattgataagttgccagataagggcgttgcggtagttcaagatcttgttaatttg
ctcggcttaaatttcgatgatgtctggcaacgtacgcgtctatgcggtgaacttcctaaa
ggcaagaaagcgggatgttggacaggttcacgcttccaaccgattccaattacaaagact
gcagatccgcaacttgctctgcgcattgttgagcgatctgatcgctacccaggaatttct
gcgacacctcttgccatcaggagttacccaacaacgctcggccttaatgggggacacgtt
cttgggtatgtcggtccattaactgaagcagacctagcgggcgcaaatggacgttcttac
tttagatctgaatcaattggtaaggctggacttgaaactgtctatgacgaatatctgcgt
ggtgttccgggcatcaaaacttttatcgttgatcgcaaagaagcagtaactacgactagt
aagaacactaagccaactgctggaaaccatcttgttactagccttgatatacgtcttcag
gcagcagctgaagcggcacttgcaggtgcagtaaaacgtgcacgaggatctggattccgc
gccgatggtggagctgccgttgttctcgatgttcgcaatggccaggtgttggcacttgct
tcatatccaacctttgatcccaacgcatttgaaaaaggattgagcgttcaagaggcgaat
gatctttatagcgaatcaaacggggtgccagcacttaatcgcgctcttcaaggtttgtat
gcaccagcatcaacgtttaaatctgtttcaattattgctgccaaagatgcgggatatgac
ctcaacgcttcctatgcctgcccatctgaagtacaggtcggtactcgcgcattccagaac
tttgaaagcaaggcgcaaggaacgctctctatgaagaaggcgctggctgtttcttgcgac
acgatttggtatcgcattgcctacgacgagtggcttcgtgatggtggattgaagccaaaa
tcaaaccccaatgactacttctttaaggcagcggcaaagttcaaggtaggcgagaaaact
ggagtggacctgccatcagaatctgctggtcgccttgcagatcgcgagtggcgcaaggat
tggtatagccagaataaagatttctattgcaactacaaaacccgagctaccaaagcgcaa
cagacgccattcttgttacagctagctcgtgagaactgcattgatggcgacaagatccgt
gccggtgacgctgttaacttctcaatcgggcagggagatactgtcgttactccgattaaa
ttggcacagatgtatgcagcgattgcaaatggtggaactatctggaagccaactattgcg
aaggcaattgtgaagacagatggaactgttcttcgaacatttaagcctgaaaaacttggc
gaccttggtgttgaccaagagactcttgtattccttcgagatgcacttcgtgaagtaacg
atttctggaacagcagccggagcattttcaggattccctgtggcaactgcgggaaagact
ggaactgcacaagtcttcggtcgaaatgcaaatggcagcgcaaaggcagacacctcttgg
tatgcatcattcgcgcccgcgaagaatccacgttacgccgttgtcatgatggtgagccag
ggcggatacggatcaggaacatctggtgtcggtgtgcgtcagatttatgaaacaatcttt
ggcgcacaaggttcaacagtgaaacctgaattggcactctttcccgcaggaaagccaccg
acaaaacttccgcgaatttcacctgcgactaaaccaaagccatctattctcaatccagga
aaaccaaaggctgttgcatctgcaactcccgctgctaaggtgaaggtgaaggcgaagcga
tga
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