Candidatus Planktophila sulfonica: A1sIA56_04770
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Entry
A1sIA56_04770 CDS
T05158
Name
(GenBank) excinuclease ABC subunit A
KO
K06020
energy-dependent translational throttle protein EttA
Organism
psuf
Candidatus Planktophila sulfonica
Brite
KEGG Orthology (KO) [BR:
psuf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psuf03016
]
A1sIA56_04770
Transfer RNA biogenesis [BR:
psuf03016
]
Prokaryotic type
tRNA transport factors
tRNA export factors
A1sIA56_04770
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
ABC_tran_Xtn
SMC_N
AAA_29
AAA_22
AAA_23
AAA_27
MMR_HSR1
AAA_15
Dynamin_N
cobW
NB-ARC
AAA_18
DLIC
nSTAND3
DUF489
Motif
Other DBs
NCBI-ProteinID:
ASY16210
UniProt:
A0A249KHC6
LinkDB
All DBs
Position
complement(955254..956921)
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AA seq
555 aa
AA seq
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MAEFIYTMKKARKAHGEKVILDDVTLMFLPGAKIGVVGPNGAGKSTVLQIMAGLQQPSNG
EAYLSPGYTVGILMQEPKLNEEKTVLENVQEGVAETMEMVRRFNEISEEMANPDADYDKL
LAEMGELQEQLDHRNAWELDSQLEQAMDALRCPPADADVSVLSGGEKRRVALCKLLLEAP
DLLLLDEPTNHLDAESVLWLEQHLSKYPGTVVAITHDRYFLDNVAQWILELDRGRAYPYE
GNYSTYLETKGARLKVEGQKDAKRAKRLAEELDWVRQNAKGRQTKSKARLARYEEMAAEA
DKMRKLDFDEIQIPPGPRLGNVVVEVENLVKGFGDRVLIDDLSFTLPRNGIVGVIGPNGA
GKTTLFKTILGLEPADSGNVKIGETVKISYVDQSRGGIDPKKSLFEVVSDGLDFMKVGQV
EMPSRAYVAAFGFKGPDQQKPAGVLSGGERNRLNLALTLKQGGNLLLLDEPTNDLDVETL
GSLENALLEFPGCAVVISHDRWFLDRVATHILAYEGDSKWFWFEGNFESYEENKIARLGA
DAARPHRATYRKLTR
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggctgagttcatttacacgatgaagaaggcgcgtaaagcgcatggtgagaaggtaatt
ctcgacgacgtaactttgatgttcttgcctggcgcaaagatcggtgttgttggcccgaac
ggtgcaggtaaatcaacagttctccagatcatggctggtcttcaacagccatctaatggc
gaggcatacctatctcctggatacacagtcggaatcctgatgcaggaaccgaagctgaat
gaagagaaaactgttcttgaaaatgtgcaagaaggtgtggcagaaaccatggagatggtt
cgccgcttcaatgaaatttctgaagagatggcaaaccctgatgctgactacgacaagttg
ttggctgaaatgggagagctccaagaacaactcgatcaccgcaatgcgtgggaactcgat
tcacaactcgaacaagcaatggatgcacttcgttgcccaccagctgatgctgatgtaagc
gtgctctctggtggagaaaagcgccgcgttgctttatgtaagttgctccttgaggcacca
gatctattacttctcgacgaacccactaaccacttggatgctgaatccgttctatggctt
gaacaacacttgagcaagtacccaggcactgttgtagcgattacgcacgatagatacttc
ttggacaatgttgcgcaatggattcttgaactcgaccgcggtcgtgcatatccatatgaa
ggcaactactcaacatatcttgaaacaaagggtgcgcgtcttaaggtcgagggccagaaa
gatgcaaagcgcgcgaagcgtttggcagaagaactcgactgggtgcgccagaatgcaaag
ggccgtcagacaaagtcgaaggctcgtcttgcacgctacgaagagatggctgccgaagca
gacaagatgcgtaagttggactttgatgaaattcagattccacctgggccacgtcttgga
aacgttgtcgttgaagttgaaaacttagttaaggggtttggcgatcgcgtattgattgat
gatttgtcattcacgcttcctcgcaacggaatcgttggagtaatcggacctaacggtgct
ggtaagaccacgctctttaagaccattcttgggctagaaccagctgattcaggtaacgtc
aagattggtgaaaccgtaaagatttcttacgtcgatcagtcacgtggcggaattgatcca
aagaagtcactcttcgaagttgtttctgacggacttgatttcatgaaggtcggacaagtt
gaaatgccatcgcgtgcatacgttgcagcatttggtttcaagggtcctgatcagcagaag
ccagccggagtcctttcaggtggagaacgtaaccgcctcaacttggcacttactttgaag
cagggcggcaacttgttgcttctcgacgaacctacaaacgacctcgatgtggaaacactt
ggctcacttgaaaatgcgttgcttgaattccctggctgcgccgttgtgatctctcacgat
cgttggttcctagaccgtgtagcaacacacatcttggcttacgaaggtgactcaaagtgg
ttttggtttgaaggaaactttgaatcctatgaagagaataagattgcacgtttgggtgct
gatgcggctcgtccacatcgcgccacataccgaaagctcactcgctaa
DBGET
integrated database retrieval system
