Candidatus Planktophila sulfonica: A1sIA56_05305
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Entry
A1sIA56_05305 CDS
T05158
Name
(GenBank) DNA helicase II / ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
psuf
Candidatus Planktophila sulfonica
Pathway
psuf03420
Nucleotide excision repair
psuf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psuf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A1sIA56_05305
03430 Mismatch repair
A1sIA56_05305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psuf03400
]
A1sIA56_05305
Enzymes [BR:
psuf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A1sIA56_05305
DNA repair and recombination proteins [BR:
psuf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A1sIA56_05305
MMR (mismatch excision repair)
Other MMR factors
A1sIA56_05305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
DEAD
Motif
Other DBs
NCBI-ProteinID:
ASY16306
UniProt:
A0A249KHT5
LinkDB
All DBs
Position
complement(1055071..1057314)
Genome browser
AA seq
747 aa
AA seq
DB search
MTTTDPLLDGLNPQQQKAVSHAGSPLLVVAGAGSGKTRVLTRRIAYIMARREVRPYEILA
ITFTNKAAGEMKERVTELVGPIAKSMWVSTFHSSCVRMLRQEVERLGYSSTFSIYDSADS
QKLISRVMETLNIDPKRYPARQFQNLISNAKNELQTPYEYLSHATNQFETIVADVYTMYE
KRLQQANAMDFDDLIMKTVQVLQKFPEAKARFRSRFRHILVDEYQDTNHAQYQLVKELTG
VEGDGFPLAELCVVGDADQSIYGFRGATIRNILQFEVDYPNAATVLLEQNYRSTQNILNA
ANAVITKNESRKEKNLWSDAGSGAPLVGYVAESEYDEAEFIKSEIRSLQDMGHSNPGDTA
VFYRTNAQSRIFEEIFMRAAIPYKVVGGLRFYERKEVKDLLAYLRVLANPDDEVSIRRII
NLPKRGIGDRALEEVEIFAQAQGISFWNALLRVSEATSVPNKAAQSIMNFTSMLVALQTL
VEAKTKPSVIIEAVLEQSGLLTELETSKDPQDEVRVENLKELVSASMEYEERPFEELGED
EEISLSGFLEKVSLVADADEIPDGEDHGGVVTLMTLHTAKGLEFPTVFLTGMEDGIFPHA
RTLDDPKEIEEERRLAYVGLTRAEKRLYISRAEYRLTFGTPKYNPGSRFLDEIPTDLIEW
KNEGRSTFTTSSAVRKSRLPSGPPPRATGKKSTAMVLEVGQRVSHDTFGLGTVVALGGEG
DKSEATINFGQYGDKRLLLRYAPVTAL
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgaccgacccattgctcgacggactcaatccgcagcaacagaaggcggtttct
catgctggttctccgcttctcgtcgtagctggcgctggttctggaaagactcgagttctc
acgcgtcgcatcgcctacatcatggctcgtcgcgaagtccgcccctacgaaatcttggca
attacttttaccaataaggctgctggcgagatgaaggagcgcgtgacggaattagtcggg
ccaatcgctaaatcgatgtgggtctcaacatttcactcatcatgtgtgcgcatgcttcgc
caagaagttgaacgcttgggttacagcagcacatttagtatttacgattcagctgattcg
cagaagctcatttcacgcgtaatggaaaccctcaatatcgatccaaagcgttacccagct
cgccaatttcaaaacttgatttcaaatgcaaagaacgaactacagactccgtacgagtat
ttaagccacgccaccaatcaatttgaaaccattgtcgccgatgtttacaccatgtacgag
aagcgtttacagcaagccaacgccatggatttcgatgatttgattatgaagacagttcag
gtcttgcagaagtttcctgaagcaaaggcgcgctttcgttctcgattccgccacatcttg
gtcgatgaatatcaggacaccaaccatgcccagtatcaattagttaaagagctcaccgga
gttgaaggcgacggtttcccgctcgctgaactctgtgttgtaggagatgcggatcaatcc
atttacggtttccgcggcgcaaccattcgaaatattttgcaatttgaggttgattaccct
aacgctgcaacagtcttgctcgagcaaaattaccgctctacccagaacatccttaacgca
gctaacgcagtgattactaagaacgaatctcgtaaagagaagaacctctggtcagatgct
ggttctggtgcgccacttgttggatatgtagccgaatctgaatatgacgaagctgaattc
attaaatctgagatccgctcgctacaagatatgggccattccaatccaggcgatacagcg
gtcttctatcgcaccaacgcccagtctcgtatcttcgaagaaatctttatgcgcgctgcc
attccttacaaagtcgttggtggccttcgattctacgaacgtaaagaggtaaaggattta
cttgcctaccttcgcgtgctggcaaaccctgatgatgaagtctctattcgccgcattatt
aatttacctaagcgcggcatcggcgatcgcgccttagaagaagttgaaatctttgcgcaa
gcccaaggcatctcattttggaatgcgctcttgcgagtttccgaggcaacgtcggtaccc
aacaaggccgcccaatccatcatgaacttcacttccatgttggtagcacttcaaactctt
gtagaagctaagaccaagccatcagtcatcatcgaagctgttctcgagcaatcaggttta
ctcactgaacttgaaaccagtaaagatccgcaagatgaagttcgtgtagaaaacctcaag
gaacttgtctcagcatcaatggaatatgaagaacgcccatttgaagaactcggcgaagat
gaagaaatttcgctgtctggcttccttgagaaagtttcattggttgcggatgccgacgag
atcccggatggcgaggaccacgggggagtcgtcactttgatgactctgcacaccgcaaag
ggactcgaatttccaacggtatttctcaccggcatggaagacggaatctttccgcatgca
cgaacccttgatgatccaaaagagatcgaagaagaacgtcgcttggcttatgtcggttta
actcgcgcagaaaagcgtctctacatttcgcgcgctgaatatcgtttaactttcggaaca
ccgaagtacaacccaggttctcgcttcctcgatgaaatcccaaccgatctcatcgaatgg
aagaatgaaggacgcagcactttcacaacatcatctgcagttcgtaaatctcgacttcca
tcaggtccaccacctcgcgccaccggcaagaaatcaactgcgatggttctcgaggtcgga
cagcgtgtgtcacatgacacattcggattaggtaccgtcgtagcccttggtggcgaaggc
gataagtctgaggcgaccatcaacttcggccagtacggcgataagcgcctcttgctgcgc
tatgcccctgtcacagccctgtaa
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