Candidatus Planktophila sulfonica: A1sIA56_05345
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Entry
A1sIA56_05345 CDS
T05158
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
psuf
Candidatus Planktophila sulfonica
Pathway
psuf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psuf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A1sIA56_05345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psuf03019
]
A1sIA56_05345
03110 Chaperones and folding catalysts [BR:
psuf03110
]
A1sIA56_05345
03029 Mitochondrial biogenesis [BR:
psuf03029
]
A1sIA56_05345
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psuf04147
]
A1sIA56_05345
Enzymes [BR:
psuf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
A1sIA56_05345
Messenger RNA biogenesis [BR:
psuf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
A1sIA56_05345
Chaperones and folding catalysts [BR:
psuf03110
]
Heat shock proteins
HSP60 / Chaperonin
A1sIA56_05345
Mitochondrial biogenesis [BR:
psuf03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
A1sIA56_05345
Exosome [BR:
psuf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
A1sIA56_05345
Exosomal proteins of other body fluids (saliva and urine)
A1sIA56_05345
Exosomal proteins of breast cancer cells
A1sIA56_05345
Exosomal proteins of colorectal cancer cells
A1sIA56_05345
Exosomal proteins of bladder cancer cells
A1sIA56_05345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ASY16314
UniProt:
A0A249KHQ1
LinkDB
All DBs
Position
complement(1064000..1065634)
Genome browser
AA seq
544 aa
AA seq
DB search
MGKMLEFDEHARRAMERGVNQLADTVKVTLGPKGRNVVIAKSFGAPTITNDGVTIAKEIE
LSDPVENMGAQLVKEVATKTNDVAGDGTTTATVLAQAMVKEGLRNLAAGAQPMDLKQGIE
AAVEAISARLRENATVVKDKAQIADVATISAQDRAIGDLIAEAMDKVGKDGVITVEEAST
TALELEFTEGMQFDKGYISPYFVTDQDRMESVLEDAYILLVSNKVSALAELLPLLEKVSQ
AGKPLLIIAEDVEGEALSTLVVNRMRGVFTSVAVKAPAFGDRRKSILQDIAILTGATVIS
EEVGMKLEAATLEDLGRARRIVVTKETTTIVDGAGDKSSVSGRIGELRAEISQSDSDWDR
EKLQERVAKLSGGVCVIKVGAHTEVELKEKKHRLEDAISATRAAVEEGIVIGGGAALVHA
ADALNDNLGFTGDKAVGVALVRKACDEPLRWIAENAGLEGYVVVAKVRAMKHNEGFNAAT
DVYGDLAKDGVIDPVKVTRSALANAASIAAMFITTEAVVFERPANEEPASSGHGHSHGPG
GHSH
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaatgttggaattcgacgagcatgctcgtcgcgcaatggaacgtggagttaac
caactcgcggataccgtcaaggtaacactcggacctaagggccgtaacgtcgtcatcgct
aagtcatttggcgcaccaacaatcacaaacgatggtgtgacaattgccaaggagatcgaa
ctttcagatccagtagaaaacatgggcgcacagctcgttaaggaagttgctacaaagacc
aacgatgtcgctggcgatggaacaacaactgcaacagtgcttgctcaggcaatggttaag
gaaggtcttcgtaaccttgctgccggcgcacagccaatggatctcaagcagggaatcgaa
gcagctgttgaggcaatctcagctcgtcttcgcgagaacgcaactgtcgtaaaagacaag
gcgcagatcgcagatgttgcaacgatttcagcacaagatcgcgcaatcggagatctcatc
gcagaagcgatggataaggtcggcaaagatggcgtcatcactgttgaagaagcatcaaca
acagctctcgaactcgaattcacagaaggaatgcagttcgataagggctacatctctcca
tacttcgtcaccgatcaagatcgcatggaatctgtacttgaagatgcttacatccttctc
gtcagcaacaaggtctcagctcttgctgaacttcttccacttcttgagaaggtttctcag
gcaggaaagccacttcttatcatcgctgaagacgttgaaggtgaagcgctttcaactctc
gttgtaaaccgcatgcgcggagtatttacttccgttgccgttaaggcacctgcattcgga
gatcgtcgcaagtcaatcttgcaggacattgcaatccttacaggtgcaactgttatctct
gaagaagttggtatgaagctcgaggctgcaactcttgaagatctcggtcgcgctcgtcgc
atcgtggtcacaaaagagacaaccacaatcgttgatggcgctggcgacaagtcatcagta
tcaggacgtattggcgaacttcgtgcagagatttcacaatctgattctgactgggatcgc
gaaaagcttcaggagcgagttgcaaagctctctggtggagtttgcgtaatcaaggtcggc
gcacatactgaagttgagttgaaggagaagaagcaccgtcttgaagatgcaatctctgca
actcgcgcagctgttgaagaaggaatcgttatcggcggaggcgctgcactcgtgcatgct
gcagatgctcttaatgacaacctcggcttcacaggtgataaggctgtcggtgttgcactt
gtccgcaaggcatgtgatgaaccacttcgctggattgcagagaacgctggactcgaaggc
tacgtagtagttgcaaaggtccgcgcaatgaagcataacgaaggcttcaacgctgcaact
gatgtctatggcgatcttgcaaaagatggcgtcatcgacccagtaaaggtgactcgttca
gcactcgctaatgctgcatcaattgctgcaatgttcattacaacagaagctgttgtattc
gagcgtccagcaaatgaagagccagcatcaagcggccacggccactcacacggtcctggt
gggcatagccactaa
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