Pseudarthrobacter sulfonivorans: AU252_03225
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Entry
AU252_03225 CDS
T04210
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
psul
Pseudarthrobacter sulfonivorans
Pathway
psul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AU252_03225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psul03019
]
AU252_03225
03016 Transfer RNA biogenesis [BR:
psul03016
]
AU252_03225
Enzymes [BR:
psul01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AU252_03225
Messenger RNA biogenesis [BR:
psul03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AU252_03225
Transfer RNA biogenesis [BR:
psul03016
]
Prokaryotic type
tRNA degradation factors
AU252_03225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_2
PCB_OB
KH_KhpA-B
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
ALV43721
UniProt:
A0A0U3FJ89
LinkDB
All DBs
Position
complement(730610..732871)
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AA seq
753 aa
AA seq
DB search
MEGPEIQFSEAVIDNGRFGKRVIRFETGRLAKQAAGAAMVYIDEDTALLSATTAGKHPRE
GFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTEAILACRLMDRPLRPAFVKGLRNEVQ
IVVTVLAINPDELYDVVAINASSMSTQLSGLPFSGPIGGVRVALVADEHGSQWVAFPKHS
QLENSVFNMVVAGRVAGDDVAIMMVEAEATDNSWNLIKEQGATAPTEEVVSEGLEAAKPF
IKALCDAQADLAARAAKPTVEFPVFLDYQDDVYAAVESAAAEKLAAIFQIADKQERDVAT
DSLKDEVTSSLAGQFEGRDKELSAAFRSVTKQVVRQRILKDQIRIDGRGLTDIRQLTAEV
EVLPRVHGSAIFERGETQIMGVTTLNMLKMEQQIDSLSPVTRKRYMHNYNFPPYSTGETG
RVGSPKRREIGHGALAERAIMPVLPSREEFPYAIRQVSEALSSNGSTSMGSVCASTLSLL
NAGVPLKAAVAGIAMGLVSDQVDGQTRYAALTDILGAEDAFGDMDFKVAGTAEFVTAIQL
DTKLDGIPASVLAAALKQAREARLHILDVLNSAIDTPDELSEFAPRVIAVKIPVDKIGEV
IGPKGKMINQIQEDTGADISIEDDGTVYIGATNGPSADAARSAINAIANPQIPEIGERYL
GTVVKTTTFGAFISLTPGKDGLLHISELRKLASGKRVDNVDDVVSVGQKIQVEITKIDDR
GKLSLSPVVAEEEGAGEAERVHASAAEGAAEAE
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
ttggagggtcccgaaatccagttctcagaagcagtcattgacaatggccgctttggcaag
cgtgtaatccgctttgaaaccggccgtcttgccaagcaggcagccggcgcagccatggtg
tacatcgacgaagacaccgcactgctgtccgccaccaccgcgggcaagcacccgcgcgaa
ggcttcgacttcttcccgctgacggttgacgttgaagagcgcatgtacgccgccggccgt
atcccgggctcgttcttccgccgtgaaggccgcccgtccaccgaggccatcctggcctgc
cgcctcatggaccgcccgctgcgtccggccttcgtcaagggcctgcgcaacgaggtccag
atcgtggtgaccgtcctggccatcaaccccgacgagctctacgacgtggtggccatcaac
gcctcctccatgtccacccagctctcgggcctgccgttctccggcccgatcggcggcgtc
cgcgttgccctcgtcgctgacgagcacggttcacagtgggttgctttccccaagcactcc
cagctcgagaactccgtgttcaacatggttgtagccggccgtgttgccggtgacgacgtc
gccatcatgatggtcgaagccgaagcaaccgacaactcctggaacctcattaaggaacag
ggcgccaccgctcccaccgaagaggttgtctccgagggtctcgaggctgccaagccgttc
atcaaggcactctgcgacgcccaggcggacctggctgcacgcgctgccaagcccaccgtc
gagttcccggtcttcctggactaccaggatgacgtctacgccgctgttgagtccgctgcc
gctgagaagctggccgctatcttccagatcgccgacaagcaggaacgcgatgttgcaacg
gattcgctcaaggacgaagtcacttcttccctggccggccagttcgaaggccgcgacaag
gagctgtccgcagcattccgctcggtcaccaagcaggttgtgcgccagcgcatcctcaag
gaccagatccgcatcgacggccgtggcctgacggacatccgccagctcaccgcagaggtt
gaggttctgccccgcgtgcacggctcggcaatcttcgagcgcggcgaaacccagatcatg
ggtgtcaccacgctgaacatgctcaagatggaacagcagatcgattcgctgtcgcccgtc
acgcgcaagcgctacatgcacaactacaacttcccgccgtactccaccggcgagaccggc
cgcgtgggttcgcccaagcgccgcgaaatcggccacggcgccctcgccgagcgcgccatc
atgccggtgctgccgtcccgcgaggaattcccctacgcgatccgccaggtgtctgaggct
ctcagctccaacggttcgacgtcgatgggttccgtctgcgcttcgacgctgtccctgctc
aatgcaggtgtgccgctgaaggcagctgttgcaggtatcgccatgggcctggtatccgac
caggttgacggccagacccgttacgcagccctgaccgatatcctcggcgccgaagatgct
ttcggcgacatggacttcaaggttgccggcacggccgaattcgttacggccatccagctg
gacacgaagctcgacggcatccccgcttccgtgctggcagcagcgctgaagcaggcccgc
gaagcccgcctgcacatcctggacgtcctgaactccgcgatcgacaccccggatgagctc
tccgagttcgcgccgcgcgtcatcgcggtcaagatcccggttgacaagatcggcgaggtc
attgggcccaagggcaagatgatcaaccagatccaggaagacaccggcgccgacatctcc
atcgaggacgacggcacggtctacattggcgccaccaacggtccgtctgctgacgcagca
cgctccgccatcaacgccatcgccaacccgcagattccggaaatcggcgagcgctacctg
ggtacggtcgtcaagaccaccaccttcggtgccttcatctccctaaccccgggcaaggac
ggcctgctgcacatctccgagctccggaagctggccagtggcaagcgcgtggataatgtt
gatgacgtggtttccgtgggccagaagatccaggttgaaatcaccaagatcgatgaccgc
ggaaagctgtccctgtcgcccgtagtggctgaagaagaaggcgccggcgaagccgagcgc
gttcacgcttccgccgcagagggcgctgccgaagcggagtag
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