Pseudarthrobacter sulfonivorans: AU252_16815
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Entry
AU252_16815 CDS
T04210
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
psul
Pseudarthrobacter sulfonivorans
Pathway
psul03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
psul00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AU252_16815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psul03021
]
AU252_16815
03400 DNA repair and recombination proteins [BR:
psul03400
]
AU252_16815
Enzymes [BR:
psul01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AU252_16815
Transcription machinery [BR:
psul03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AU252_16815
DNA repair and recombination proteins [BR:
psul03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AU252_16815
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Cluap1
DUF4407
1-cysPrx_C
Motif
Other DBs
NCBI-ProteinID:
ALV42604
UniProt:
A0A0U3R0I1
LinkDB
All DBs
Position
3710567..3714466
Genome browser
AA seq
1299 aa
AA seq
DB search
MSSESSFGLMQIGLATADDIRGWSYGEVKKPETINYRTLKPEKDGLFCEKIFGPSRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITSVDADSRHEELPNLQVEHDIEKKQLIDNRDSDIATIARDLENE
IARLEGEGAKAADKKKARDSADRQMANVRKRADAEIERLEQVWDRFKNLKVADLEGDEGL
YRELRDRYGMYFEGSMGAEAIKKRLENFDMQAESDLLRDIIANGKGQRKTRALKRLKVVN
AFLTTNNSPLGMVLDAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDSLFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKQMALELFKPFVMKRLVDLNHAQNIKSAKRMVERYR
PQVWDVLEEIITEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCGAFNADFDGDQ
MAVHLPLSPEAQAEARILMLSSNNILKPSDGRPVTLPSQDMIIGLYHLTTKRVGSAGEGR
VFSSVAEAIMAYDLRELHLNSQVRIRLEGFVPYAGWEAPEGWEPGQPVIVQTSLGQVIFN
ETLPADYPWVENVADKGELSTIVNDLAERYPKVVTAATLDNLKDAGFYWATRSGVTVAIS
DIEVPKDKPRILAGYETMAAKIQGQYDKGLIDDDERRQELIEIWNKATNEIAQVMRDNLS
PMNTINRMVSSGARGNWMQVRQIAGIRGLVANPKGEIIPRPIKSSYREGLSVLEYFIATH
GARKGLADTALRTANSGYLTRRLVDVSQDVIVREEDCGTERGLVTAIAVPDANGELVLDE
NVENSAYARTLAVDVVDSKGNVLAAGGTDCGDVVIAELFAAGITEVKVRSVLTCESSVGT
CALCYGRSLATGKTVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGAVSASGGDDITQGLP
RIQELFEARTPKGVAPIAEAAGRIAIEESERQMRLVITPDDGSEEIAYPVLRRSRLLIED
GEHVTVGQKLINGPVDPKQVLRIMGPRAAQKFLVDEVQGVYRSQGIGIHDKHVEVIVRQM
LRRVTVIESGESDLLPGELAERSRFEEANRRVVSEGKTPASGRPELMGITKASLATESWL
SAASFQETTRVLTQAAMEGKSDPLLGLKENVIIGKLIPAGTGLPRYTEVTVEPTEEAKAN
LFTGPSAFSDFSYDSLGGDGAPEFHAIPLDDYDLGNDFR
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcgaatcctccttcggcctcatgcagatcggcctcgccaccgcggatgacatc
cgtggctggtcttacggcgaggttaagaagccggaaaccatcaactaccgcacgctcaag
cccgagaaggacggcctcttctgcgagaagatcttcggcccttcccgtgactgggaatgc
tactgcggtaagtacaagcgtgtgcgcttcaagggcatcatctgcgagcggtgtggcgtt
gaagtcacccgtgcgaaggtccgccgtgagcgcatgggccacatcgagctggccgccccg
gtcacgcacatctggtacttcaagggtgttccgtcccgtttgggctacctccttgacctg
gcaccgaaggacctcgaaaaggtcatctacttcgctgcctacatgatcaccagcgtcgac
gccgacagccgccacgaggaactgcccaacctgcaggttgagcacgacatcgagaagaag
cagctgatcgacaaccgcgactccgacatcgccacgatcgcccgtgacctcgaaaacgag
atcgcgcgcctcgaaggtgaaggtgccaaggctgccgacaagaagaaggcccgcgactcc
gcggaccgtcagatggccaacgtgcgtaagcgtgccgacgccgagatcgagcgcctcgag
caggtctgggaccgtttcaagaacctgaaggtcgcagacctcgaaggcgacgaaggcctc
taccgcgagctgcgcgaccgctacggcatgtacttcgagggctccatgggtgccgaagcc
atcaagaagcgccttgagaacttcgacatgcaggccgagtctgacctgctgcgcgacatc
atcgccaacggcaagggccagcgcaagacccgcgccctgaagcgcctgaaggtggtcaac
gcgttcctgaccaccaacaacagcccgctcggcatggtgctggacgctgtcccggtgatc
ccgccggaactgcgcccgatggtccagctggacggtggccgcttcgcgacctccgacctc
aacgacctctaccgtcgtgtgatcaaccgcaacaaccgcctcaagcgcctgcttgacctc
ggtgccccggagatcatcgtcaacaacgagaagcgcatgcttcaggaagctgttgacagc
ctcttcgacaacggccgtcgcggccgtccggtcaccggtcctggcaaccgtccgctgaag
tccctgagcgacatgctcaagggcaagcagggccgtttccgccagaacctcctcggcaag
cgcgttgactactccggccgttcggtcatcgtcgttggcccgcagctgaagctgcaccag
tgtggcctgcccaagcagatggcactggagctcttcaagccgttcgtgatgaagcgcctg
gttgacctcaaccacgcacagaacatcaagtcggccaagcgtatggtcgagcgttaccgt
ccgcaggtctgggacgtgctggaagagatcatcaccgaacacccggtgctgctcaaccgt
gcacctaccctgcaccgcctcggcatccaggcgttcgaaccgcagcttgttgaaggtaag
gcaatccagctccacccgctggtttgtggcgccttcaacgctgacttcgacggcgaccag
atggcagtccacctgccgctgagccccgaggcccaggcggaggcacgcatcctgatgctg
tcctcgaacaacatcctgaagccgtccgacggccgcccggtcaccctgccttcgcaggat
atgatcatcggtctctaccacctgaccaccaagcgtgtcggttcagccggcgaaggacgc
gtcttctcctcggttgccgaagccatcatggcttacgacctccgcgagctgcacctgaac
tcgcaggtccggatccgtctcgaaggcttcgttccttacgctggctgggaagccccggaa
ggctgggagcccggccagccggtcatcgtccagacctccctgggccaggttatcttcaac
gagaccctgccggccgattacccgtgggttgagaacgttgcggacaagggcgaactgtcc
acgatcgtcaacgacctcgccgagcgctacccgaaggtggtcacggcggcaacgctggac
aacctgaaggacgccggtttctactgggccacccgctcgggcgttacggttgccatctcg
gacatcgaggtgcccaaggacaagccgcggatcctcgctggttacgagaccatggctgcc
aagatccagggccagtacgacaagggcctgatcgacgacgacgagcgtcgccaggaactg
atcgagatctggaacaaggcaaccaacgaaatcgcccaggtgatgcgtgacaacctgtcg
ccgatgaacaccatcaaccgcatggtgtcctccggtgcacgtggtaactggatgcaggtc
cgtcagatcgcgggtatccgtggcctggtggccaaccctaagggtgaaatcatcccgcgt
cccatcaagtcctcctaccgcgagggcctgtcggtgctggaatacttcatcgccacgcac
ggcgcccgtaagggtctggctgacaccgcgctgcgtaccgccaactcgggttacctgacc
cgtcgtctggtggacgtgtcgcaggacgtcatcgtccgcgaagaggactgcggcaccgaa
cgcggcctggtcacggcaatcgccgtgccggacgccaacggcgagctggtcctggacgag
aacgtcgagaacagcgcctacgcccgtacgctcgctgttgatgttgtggactccaagggc
aatgtccttgcagccggcggcaccgactgcggcgacgtggttatcgctgagctgttcgca
gccggcatcaccgaggtcaaggtccgctccgtactcacctgtgagtccagcgtcggcacc
tgcgccctgtgctacggccgttcactggccaccggcaagaccgtggacatcggcgaggcc
gtcggcatcatcgccgcacagtccatcggtgagcccggtacccagctgaccatgcgtacg
ttccacaccggtggtgctgtttccgccagcggtggcgacgacatcacccagggtctgccc
cgtatccaggagctcttcgaagcccgtactccgaagggtgtcgcaccgattgctgaagca
gccggccgcatcgccatcgaagagtccgagcgccagatgcgcctggtcatcactccggat
gacggatctgaagagatcgcctacccggtacttcgccgttcacgcctcctcatcgaggat
ggcgagcacgtcacagtaggccagaagctcatcaacggtccggtggatcccaagcaggtt
ctgcgcatcatgggtccccgtgccgcgcagaagttcctggtggacgaagtccagggcgtg
taccgcagccagggcatcggtatccacgacaagcacgtcgaggttatcgtccgccagatg
ctgcgccgcgtcacggtcatcgagtccggcgaatcggatctgctccccggcgagctcgcc
gagcgcagccgcttcgaggaggccaaccgccgcgttgtgtccgagggcaagactccggct
tccggacgtcctgagctcatgggcatcaccaaggcgtccctggccaccgagtcctggctg
tctgcagcttccttccaggagaccacccgcgtcctgacgcaggcggccatggaaggcaag
agtgatccgctgctcggcctcaaggaaaacgtcatcatcggtaagctgatcccggccggc
acgggtctcccgcgctacaccgaggtcaccgtggagcccactgaggaagcgaaggccaac
ctgttcaccggccccagcgcgttcagtgacttctcgtacgactccctgggcggcgacgga
gctcctgagttccacgccatcccgctggatgactacgatctcggcaacgatttccgctag
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