Pseudarthrobacter sulfonivorans: AU252_22210
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Entry
AU252_22210 CDS
T04210
Name
(GenBank) ATP-dependent helicase
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
psul
Pseudarthrobacter sulfonivorans
Brite
KEGG Orthology (KO) [BR:
psul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psul03019
]
AU252_22210
Enzymes [BR:
psul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
AU252_22210
Messenger RNA biogenesis [BR:
psul03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AU252_22210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
CON_HrpB
HA2_N
AAA_11
AAA_19
AAA_22
AAA_16
AAA_30
RoxA-like_Cyt-c
ResIII
Motif
Other DBs
NCBI-ProteinID:
ALV44123
UniProt:
A0A0U3QRI1
LinkDB
All DBs
Position
complement(4878050..4880806)
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AA seq
918 aa
AA seq
DB search
MSGTATFDLAAIGTGLAFAESLAELSTVLRAGGAAGTAVVQAPPGTGKTTLVPPLLANLS
APAGNARRVVVTQPRRVAARAAARRLAALDGSRIGDRVGYTVRGERQAGPATLVEFVTPG
ILLRRLLDDPGLESTGAVILDEVHERGLETDLLLGMLTEVRQLRGDLTLVAMSATLDAPR
FAALIGGAAANAGTGQPGTADDGGEPAPVVDCPSALYPLAVEWVPAAVARLDDRGVTRGF
LDHVADAAAQAHTAAVGQDARTDALVFVPGAWEVSYVAARLRGRAAPGTEVLELHGQVSP
AEQDQAVSGRRPGGPARIIVSTDLAESSLTVPGVRLVIDSGLTREPRRDASRGMSGLVTV
SCSRASAEQRAGRAARQGPGRVVRCYDQRTYGAAPAHVTPEIAVADLTGAALVLACWGSP
GGTGLSLPDAPPAAAMGEAIEVLRELGALARDGHATALGRTLARVPSDPRLARALLDGAA
AVGHRAAAEAVALVAGDQRAPAADLTRLLTALRTGKDPAARRWAEDVRRLETIARKEAAA
VGPSAIASLASTAPVTAAEAVGVVVALAFPDRVARRVPGDGPARYLLSSGTRAGLPAGSP
LTGQEWLAVAEVSRAAGRDSAGTGAVIRSAAPLSADIAEAAAGQLLTDTVEAQFSQGRVK
ARRERRLGAISLSSTPVRPSAEDGRAAVARALAKEGLGTIGWSTAADVLRRRLALLRREL
GEPWPDVSEPALLARLDSWLAPELEALAGGAATNSIDLTEPLRRLLPWPEAVRLAVLAPE
ALKVPSGSMVRIDYPEVSDKAAPGGAGSDGAASDQAEPGQEALGQARAHDGGRPVVAVKL
QECFGWAETPRLVDGRVPVLFHLLSPARRPLAVTDDLASFWSGPYAQVRSEMRGRYPRHP
WPEDPWTALPTARTKARM
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atctctggtaccgccacctttgatctggcggccatcggcacgggtctggcctttgctgag
tcgctcgcggagttgtccactgtgctgcgcgccggcggtgcggcgggtacggcagtggtg
caggcgccgcccggcaccggcaaaacaacgctggtcccgccgctgctcgccaacctctcc
gcgcctgcaggaaacgcccggcgcgtggtcgtcacacagccccggcgggtcgcggcgcgt
gccgccgcccggcgactggccgcattggacggcagccggatcggagaccgcgtggggtac
accgtccgcggtgaacgccaggccgggcccgccaccctggtggagtttgtcacaccgggg
atcctgctgcggcgcctgctcgatgatcccggcctggaaagcacgggcgcggtcatcctg
gacgaggtccatgaacgcggcctcgaaaccgacctgctgctggggatgctcaccgaagtg
cggcagctccgcggcgacctcacgctggtggccatgtccgccacactggacgcgccccgc
ttcgccgccctgatcgggggcgcagccgcgaatgcagggaccggacagccagggacagcg
gacgacggcggagagccggctcccgtcgtcgactgcccctcagcgctgtaccccctggca
gtggagtgggtacccgccgccgtcgcgcggttggatgaccgtggggtcacgcgcggattc
ctcgaccacgtggccgatgcagccgcgcaggcccataccgccgcggtgggtcaggacgcg
cgcaccgatgcgctggtctttgtcccgggagcctgggaggtctcctatgtggctgcccgc
ctccgcggtcgggctgctcccggaactgaggtgttggagctccacggccaggtcagccca
gccgaacaggaccaggccgtttcggggcgccggccgggcggcccggcccggatcatcgtg
tccacggatctggccgagtcatccctgaccgtacccggcgtgcgcctggtcatcgattcc
gggctgacccgcgaaccccgccgtgatgccagccgcggcatgtccggactggtcactgtt
tcctgctcccgggcatcagcggagcagcgcgccggccgggccgcgcggcagggcccgggc
cgggtggtgcgctgctacgaccagaggacctatggtgccgcgccggctcatgtgacacca
gagatcgcggtcgcggacctgaccggtgccgcgctggtcctggcctgctggggatcaccg
ggcggcaccgggctgtcgctgccggatgcaccccccgcggcagccatgggcgaggcgata
gaggtgctgcgcgaactcggagccttggcccgcgacgggcacgccaccgcgctggggcgg
acgctggccagggtcccgtccgatccccggctggcccgcgccctgctcgacggcgcagcg
gccgtaggtcaccgcgccgcagcggaagcagtggcactcgtggcgggggaccagcgggcc
ccggcggccgacctcacgcggctgttgaccgcactgcgcaccgggaaggaccccgccgcc
cggcgctgggcggaggacgtccgtcggctggagaccattgcgcggaaggaggccgccgcc
gtcggcccgtcagccatcgcctccctggccagtaccgcgccggtgactgcggcggaggct
gttggcgtcgtcgtcgccctggcattcccggaccgcgtggcccggcgtgtcccgggcgat
ggtccggcgcggtacctgctgtcgtccggcacgcgcgctgggttgccggcgggcagtccg
ctgaccgggcaggagtggctggccgtggcggaagtctcccgtgccgccggccgggactcc
gccggcaccggcgcggtgatccggtccgccgcgccgctgagcgccgatattgccgaggcg
gccgccgggcagctcctgaccgacacggtggaagcgcagttcagccagggccgcgtgaag
gccaggcgggaacgccggctgggtgccatcagcctgtcctccacccccgtccgcccctcc
gccgaggacggacgtgccgccgtggcccgcgccctcgccaaggaggggctgggaaccatc
ggatggtcgacggcggccgacgtgttgcgccgccgcctcgccttgctgcgccgcgaactt
ggcgagccgtggcccgacgtttccgaaccggccctgctggcccggctggactcctggctg
gcacccgagcttgaggcactggccggcggtgccgccaccaacagcatcgacctcaccgag
cccttgcggcggctgctgccctggccggaggcggtccgcctggcagtgctggcaccggag
gcactgaaagtaccgagcggatcgatggtacggatcgactaccccgaggtttcggacaaa
gcggcgccaggcggtgccgggtcagatggtgccgcgtccgaccaggcagaacccgggcag
gaagcacttgggcaggcacgcgcgcacgacggcggccggccggttgttgcggtcaagctg
caggagtgctttggctgggctgagacgccgcggctggtggacggcagggttcctgtcctc
ttccatctgctgtcgcccgcgcggcggccgctcgccgtgacggacgacctggcatcgttc
tggtccgggccgtacgcgcaggtgcggtccgagatgcgtggccgctaccccaggcatccc
tggccggaggatccctggacggcactgccgacggcccggaccaaagctcgcatgtag
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