Candidatus Pinguicoccus supinus: E5P55_00820
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Entry
E5P55_00820 CDS
T06931
Name
(GenBank) hypothetical protein
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
psup
Candidatus Pinguicoccus supinus
Pathway
psup03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
psup00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
E5P55_00820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psup03021
]
E5P55_00820
03400 DNA repair and recombination proteins [BR:
psup03400
]
E5P55_00820
Enzymes [BR:
psup01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
E5P55_00820
Transcription machinery [BR:
psup03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
E5P55_00820
DNA repair and recombination proteins [BR:
psup03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
E5P55_00820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_6
RNA_pol_Rpb2_45
Motif
Other DBs
NCBI-ProteinID:
QPJ58503
UniProt:
A0A7T0BRP2
LinkDB
All DBs
Position
93870..95567
Genome browser
AA seq
565 aa
AA seq
DB search
MDYRHINVYLDKKNKKNKLNLLSFLQVFSFFNIKHLLFIYYGYFFKVSVLSLNSYTDKFI
FLNDVRDFNNEIIIFKYTRVNESLIKTLTFHKIKYVDVIYTSSDSSLFYQNLVKSTILHP
NSEKFYINLYRILKSTEFSNTKNVKDYIKNLFQNSKNYDLSDTGRFRLNQKLNIYIPKQV
RLVTIVDILLAVKLLIKLYSNKSFYYLDDIDDLSVKRIKSTGSIILNQFKIGLVKTERSI
KERLVFFNISLEILNLQKLIYPKNITVTLKDFFARSPLSQFMDQVNPLSEITHKRRLTSL
GPGGLNRDRASFEVRDVHSSYYGKICPIETPEGPNIGLISSLSLYAKIDHLGFITTPYIN
IKKNNKHNENGSIVRLNAIDEYKFKIMQFCNIKNLSELNNVIVRYKNHFTKVNINLIDFA
DVSSRQIISIATALIPFIEHNDANRSLMGSNMQRQGVPLTIPSKPLVGTGLEGKVIRESK
NILFSKNSGCVIYVDSNKIIVKGGLNIHIYKLLKFMKSNSATCYTQNPIVKKNEIIFEGQ
PICDGPSSNDGILALGHNVLVGFMP
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
ttggattatcgtcatataaatgtttatttagataaaaaaaataaaaaaaacaaattaaat
ttgctttcgttccttcaagtcttttctttttttaatatcaaacatttactttttatctat
tatggctatttttttaaagttagtgttttaagtttgaatagttacactgataaatttata
tttttaaacgacgttagggattttaataatgaaattattatttttaaatatactcgagtt
aacgaatctttaataaaaactctaacttttcataaaattaaatatgttgatgttatttat
acatcttccgactccagtttattttatcaaaatttagtcaaaagtacaatactacatcca
aatagtgaaaaattctatataaacttatatagaattttaaaatctactgaattttcaaat
actaaaaacgttaaagattatattaaaaacttatttcaaaattcaaagaattacgattta
tcggacaccggtcgctttagattaaatcaaaaattaaatatctatattcctaaacaggtg
agattagtaaccatcgttgatattttgctcgcagttaaacttctaattaagctttactca
aataaaagtttttattatttggacgacattgatgatttaagtgttaaacgcataaagtca
actggaagtataatattaaatcaatttaaaataggtttagtaaaaacagaacgatccata
aaagaacgtttagttttttttaatataagtttagagatattaaatttacagaagttaata
tatcctaaaaatattacagttactcttaaagatttttttgcccgaagtcccctttcacaa
tttatggatcaagtaaatccactgtcagaaattacacacaagaggcgtttaacttcttta
ggacccgggggtttgaacagagatagagctagttttgaagttagggatgtacactcttca
tattacggtaaaatatgtcctattgaaactccagaaggtccaaatattggtttaatcagt
tcgctaagtctatacgcaaaaatcgatcatttaggttttataacaacaccttacattaat
attaaaaaaaataataaacacaacgaaaatggttcgatagtacgattaaatgctatagat
gagtacaaattcaaaataatgcagttttgtaatataaaaaatctatctgaacttaataat
gtaatagttcgttataaaaatcattttacaaaagtgaatataaatttaatagattttgct
gatgtctcttcgcgtcaaataatctctatagcgactgcacttataccctttatagagcat
aatgatgctaatagatcccttatgggatctaatatgcaaagacagggagttccccttact
ataccatcaaaacctttagtaggtactggtcttgaagggaaagtaataagagagtcaaaa
aatatattattctctaaaaattccggttgtgttatatacgttgattcaaataagattata
gttaaaggtggcttaaatatacatatctataaattattgaagtttatgaaatctaattca
gctacttgttatacacaaaatccaattgtaaaaaaaaatgaaataatatttgaaggtcaa
cctatatgcgacggaccgtcatctaatgatggcatcttagctttaggtcataatgttctt
gtagggtttatgccgtga
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