Phytohabitans suffuscus: Psuf_009190
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Entry
Psuf_009190 CDS
T06545
Symbol
recQ_1
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
psuu
Phytohabitans suffuscus
Pathway
psuu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psuu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Psuf_009190 (recQ_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psuu03019
]
Psuf_009190 (recQ_1)
03400 DNA repair and recombination proteins [BR:
psuu03400
]
Psuf_009190 (recQ_1)
Enzymes [BR:
psuu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Psuf_009190 (recQ_1)
Messenger RNA biogenesis [BR:
psuu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Psuf_009190 (recQ_1)
DNA repair and recombination proteins [BR:
psuu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Psuf_009190 (recQ_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
DNA_pol_A_exoN
Motif
Other DBs
NCBI-ProteinID:
BCB83606
UniProt:
A0A6F8YBY4
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All DBs
Position
1021394..1023109
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AA seq
571 aa
AA seq
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MLMPTGGGKSLCYQIPALVRDGTAVVISPLIALMQDQVDALRALGTRADFLNSTLDFDTR
RAVEATFLAGDLDLLYLAPEALGTPGVQRLLDRGNIALFAIDEAHCVSQWGHDFRPDYLA
LSMLHERWPSVPRIALTATATSATHAEIATRLQLEGARHFVASFDRPNIQYRIVPKNEPR
KQLLHLLRTEHAGDAGIVYCLSRASVEKIAEFLVDNGIPALPYHAGLDARTRAANQSRFL
REDGLVMVATIAFGMGIDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGLPSTAWLAYGLQ
DVVQQRKLIDGSDGDLAHRRNLAAHLDAMLALCETVECRRVQLLAYFGQESKPCGNCDTC
LAPPESWDGTIAAQKLLSTVLRLHRERNQRFGATQSIDILLGKRTDKVAQHRHDQLSVFG
IGTELSESEWRAVVRQLLAQGLLAVEGEYGTLALTEGSKGVLGRQREVKLRREPERAPTA
RAAKARSGAAAPVQLSPEAAPVFERLRAWRAATAKEQGVPAYVIFHDATLRQIAAEAPRT
LTALSTISGVGEAKLAKFGQQILETLASGED
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
gtgctcatgcccaccggcggcggcaagtcgctgtgctaccagatccccgcgctggtccgc
gacggcaccgccgtcgtgatctccccgctgatcgcgctcatgcaggaccaggtcgacgcg
ctgcgggcgctcggcacgcgggccgacttcctcaactccacgctcgacttcgacacccgc
cgggcggtcgaggccaccttcctcgccggcgacctcgacctgctctacctggcgcccgag
gcgctcggcaccccgggcgtgcagcggctgctcgaccgcggaaacatcgcactcttcgcg
atcgacgaggcacactgcgtgtcgcagtggggccacgacttccgccccgactacctcgcg
ctgtcgatgctgcacgagcggtggccgagcgtgccgcggatcgcgctcaccgccaccgcc
acgagcgccacccacgccgagatcgccacgcgcctccagctcgaaggcgcccgccacttc
gtggcgagcttcgaccggcccaacatccagtaccggatcgtgcccaagaacgagccccgc
aagcagctgctccacctgctgcgcaccgagcacgcgggcgacgccggcatcgtctactgc
ctctcccgcgcctcggtggagaagatcgccgagttcctggtcgacaacggcatccccgcg
ctgccctaccacgccgggctcgacgcgcgcacccgcgccgccaaccagtcccgcttcctg
cgcgaagacgggctggtcatggtcgcgacgatcgccttcggcatgggcatcgacaagccc
gacgtgcgcttcgtcgcccacctcgacctgcccaagtcggtcgaggggtactaccaggag
accggccgcgccgggcgcgacggcctcccctcgaccgcctggctggcgtacgggctgcag
gacgtcgtgcagcagcgcaagctgatcgacggctcggacggcgacctggcccaccggcgc
aacctcgccgcccacctcgacgccatgctggcgctctgcgagacggtcgagtgccggcgg
gtgcagctgctcgcgtacttcgggcaggagagcaagccgtgcggcaactgcgacacctgc
ctcgcgccgccggagtcgtgggacggcacgatagcggcgcagaagctcctctccacggtg
ctgcggctgcaccgcgagcgcaaccagcgcttcggcgccacccagtcgatcgacatcctg
ctcggcaagcgcaccgacaaggtcgcccagcaccgccacgaccagctcagcgtcttcggc
atcggcaccgagctgagcgagagcgagtggcgggcggtggtgcgccagctcctggcccag
gggctgctcgccgtcgagggtgagtacggcacgttggcgctcaccgagggcagcaagggg
gtgctgggcaggcagcgcgaggtcaagctccgccgcgagccggagcgggcgcccaccgcg
agggccgccaaggcacgcagcggggccgcggccccggtccagctctcgcccgaggccgcg
ccggtcttcgagcggctgcgggcgtggcgggccgcgaccgccaaggagcagggcgtgccg
gcgtacgtgatcttccacgacgcgacgctccggcagatcgcggccgaggcgcccaggacc
ctgaccgcgctgagcacgatcagcggagtcggcgaggccaagctggcgaagttcggccag
cagatcctggaaaccctagcgtccggcgaggattag
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