Phytohabitans suffuscus: Psuf_012780
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Entry
Psuf_012780 CDS
T06545
Symbol
fadD_1
Name
(GenBank) long-chain acyl-CoA synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
psuu
Phytohabitans suffuscus
Pathway
psuu00061
Fatty acid biosynthesis
psuu00071
Fatty acid degradation
psuu01100
Metabolic pathways
psuu01212
Fatty acid metabolism
psuu02024
Quorum sensing
psuu04146
Peroxisome
Module
psuu_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
psuu00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Psuf_012780 (fadD_1)
00071 Fatty acid degradation
Psuf_012780 (fadD_1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Psuf_012780 (fadD_1)
09145 Cellular community - prokaryotes
02024 Quorum sensing
Psuf_012780 (fadD_1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
psuu01004
]
Psuf_012780 (fadD_1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psuu04147
]
Psuf_012780 (fadD_1)
Enzymes [BR:
psuu01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Psuf_012780 (fadD_1)
Lipid biosynthesis proteins [BR:
psuu01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Psuf_012780 (fadD_1)
Exosome [BR:
psuu04147
]
Exosomal proteins
Exosomal proteins of breast milk
Psuf_012780 (fadD_1)
Exosomal proteins of breast cancer cells
Psuf_012780 (fadD_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Prot_ATP_ID_OB_C
Motif
Other DBs
NCBI-ProteinID:
BCB83965
UniProt:
A0A6F8YCX0
LinkDB
All DBs
Position
1411945..1413741
Genome browser
AA seq
598 aa
AA seq
DB search
MREFAVPPVVTIGPAANLTDPVWDNAAAAPDTVQFSRRTSGGWVDVTCAEFRDEVVALAR
GLVAAGVQPGDRVALMSKTRYEWTLIDYAIWSAGGVTVPIYETSSAEQVAWILSDSGATA
CFVETNTHQLAVTGVREQVPALEQVWQIETGDLAALEERGASVEAAEIDRRRAAVGAEDV
ATIIYTSGTTGRPKGCVLTHRNIYSDIKNAIPGLHNLFRQEASTLLFLPLAHSFARLIQV
GVVTARARMGHTADVKNLVPDLQAFRPTFVLSVPRVFEKVYNTAKQRAHGDGKGKIFDRA
EAVAIAYSEALDKPGGPGLGLKLQHALFDRLVYGKLRAALGGQCKDAISGGAPLGARLAH
FFRGIGVTVYEGYGLTETSPAVAVNLQNAIRVGTVGRPLPGVTIRIADDGEILVKGDIVF
SQYWNNPSATAEVLDIEGWFRSGDLGELDGDGYLTITGRKKELIVTAGGKNVAPALLEDR
IRAHPLVSQTVVVGDRQPFIAALVTIDEEAWPKWLATAGYPETDTVAEHRDDEKLRAEVQ
RAVDEANKAVSHAEAIKVFRILPHDFTEATGELTPSLKVKRGVVHKTYADEIAAIYGG
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcgagttcgccgtaccgccggtggtgaccatcggccccgccgccaacctgaccgac
cccgtctgggacaacgccgcggccgcccccgacacggtccagttctcccggcgcacgtcc
ggcgggtgggtcgacgtgacgtgcgccgagttccgggacgaggtcgtggcgctggcccgc
gggctggtcgcggccggtgtccagccgggcgaccgggtggccctgatgagcaagacgcgc
tacgagtggaccctgatcgactacgcgatctggtcggccggcggcgtcacggtgccgatc
tacgagacctccagcgccgagcaggtggcctggatcctctccgactcgggcgccaccgcg
tgcttcgtggagaccaacacccaccagctggccgtgaccggcgtacgcgagcaggtgccc
gcgctggagcaggtgtggcagatcgagaccggcgacctggcggcgctggaggagcggggc
gcgagcgtcgaggccgccgagatcgaccggcggcgggccgcggtcggcgcggaagacgtg
gccaccatcatctacaccagtggcaccacgggtcgccccaagggctgtgtgctgacccac
cgcaatatctactccgacatcaagaacgccatcccgggcctgcacaacctcttccgccag
gaggcgtcgaccctgctcttcctgccgctggcgcactcgttcgcccggctgatccaggtc
ggcgtggtcaccgcgcgggcccggatggggcacaccgcggacgtgaagaacctggtgccc
gacctgcaggcgttccgcccgacgttcgtgctctcggtgccgcgggtcttcgaaaaggtc
tacaacaccgccaagcagcgcgcacacggcgacggcaagggcaagatcttcgaccgggcc
gaggcggtcgcgatcgcctacagcgaggcgctggacaagcccggcgggccgggcctcggc
ctcaagctgcagcacgcgctcttcgaccgcctggtgtacggcaagctccgcgcggccctc
ggcggccagtgcaaggacgcgatctccggcggggcaccgctgggcgcgcggctcgcgcac
ttcttccgcggcatcggggtcaccgtctacgaggggtacgggctgaccgagacctccccc
gcggtcgccgtcaacctgcagaacgcgatccgcgtcggcacggtcggccgcccgctgccc
ggcgtgaccatccggatcgccgacgacggcgagatcctcgtcaagggcgacatcgtcttc
agccagtactggaacaacccgagcgccacggccgaggtgctcgacatcgaggggtggttc
cgcagcggcgacctgggcgagctcgacggcgacggctacctcacgatcaccggccgcaag
aaggagctgatcgtgaccgcgggcggaaagaacgtcgccccggccctgctcgaagaccgc
atccgggcgcacccgctggtcagccagacggtcgtggtgggcgaccggcagccgttcatc
gccgcgctcgtcacgatcgacgaggaggcctggccgaagtggctcgccacggccggctac
ccggagacggacacggtcgccgagcatcgcgacgacgaaaagctgcgcgccgaggtccag
agagcggtcgacgaggccaacaaggccgtctcgcacgccgaggcgatcaaggtgttccgc
atcctgccgcacgacttcaccgaggccacgggcgagttgaccccgtcgctgaaggtgaaa
cgcggcgtggtgcacaagacctacgccgacgagatcgccgcgatctacggaggctga
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