Phytohabitans suffuscus: Psuf_028800
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Entry
Psuf_028800 CDS
T06545
Name
(GenBank) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
psuu
Phytohabitans suffuscus
Pathway
psuu00040
Pentose and glucuronate interconversions
psuu01100
Metabolic pathways
psuu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
psuu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Psuf_028800
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Psuf_028800
Enzymes [BR:
psuu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
Psuf_028800
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GFIT
Motif
Pfam:
Pectate_lyase_4
Laminin_G_3
Beta_helix
3keto-disac_hyd
Motif
Other DBs
NCBI-ProteinID:
BCB85567
UniProt:
A0A6F8YHM5
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Position
complement(3191933..3193522)
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AA seq
529 aa
AA seq
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MRHKRLAAAGLAGALAAALVAFGTTSAFADTLLSDDFQDGNSNGWSKSGGTWSVVTDGSL
AYRQSGTSSDARSLVGATSWTDYSVQARVKPTGFGAANRYAGLIARAQSSSNYYALVLTS
SGGVQLIKRAGGEPVVLGTGSGAGGTGTWTTLALAASGSQLYGYVNGTLAVQATDSAFSS
GRAGIAASYASLTVDDVVVSTVSGTPTPGPTTGGPTLPPTGPPLDPSAPPIGFASVNALG
QNGTTGGAGGPTVTVDTASELLTAIAQPGPLNIRVQGMIALPGPMHDVTSDKTIIGVGAS
SGITGAGFNIGLPVSSVTSPPANAVHNVIIRNLNFRDAADDSINVQMYSHHVWIDHNDLA
EGYDGLIDIKRGSSYVTVSWNHTHNHTKNMLLGHDDSNAAQDTGYLKVTYHNNWFDRTPQ
RNPRVRFGEPVHVFNNYFVYNTDTGPACQANSGCVVEGNYFEDVEEPVTNSYAGPSGRCV
ARNNVFVGESGQPDCSGSVQEPSAYYSYTVADPNTVKSVVMAGAGTGRL
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
gtgcgacacaagcgccttgcggcggcggggctggccggtgcgctcgcggccgcgctggtt
gccttcggcaccaccagcgcgttcgccgacacgctgctctccgacgacttccaggacggc
aactccaacggctggtcgaagtcgggcggcacctggtcggtggtgacggacggctcgctc
gcgtaccggcagtccggcaccagcagcgacgcgcgcagcctcgtcggcgccacgagctgg
accgactactcggtgcaggcacgggtcaagccgaccgggttcggcgcggccaaccggtac
gccggcctgatcgcccgcgcgcagagcagcagcaactactacgccctcgtgctcaccagc
tcgggcggcgtacagctgatcaagcgggccggcggcgagccggtcgtgctcggcaccggc
tcgggcgccggcggcaccggcacctggaccacgctggcgctcgcggcctccggcagccag
ctgtacggctacgtcaacggcaccctcgcggtgcaggccacggacagcgcgttcagctcc
ggccgggccggcatcgcggccagctacgcgagcctcacggtcgacgacgtggtggtcagc
accgtcagcggcactccgacgcccggccccacgacgggcggtccgacgctgccgccgacc
gggccgccgctggacccgagcgccccgccgatcggcttcgcctcggtcaacgccctgggc
cagaacggcaccacgggcggcgccggcggaccgacggtcaccgtggacaccgcgtccgag
ctgctgaccgcgatcgcgcagcccggcccgctcaacatccgggtacaggggatgatcgcc
ctgcccggcccgatgcacgacgtcacctcggacaagacgatcatcggggtcggcgccagc
tcgggcatcaccggcgccggcttcaacatcggcctgcccgtcagcagcgtcacgtccccg
ccggccaacgccgtgcacaacgtgatcatccggaacctcaacttccgggacgcggccgac
gactcgatcaacgtgcagatgtactcgcaccacgtgtggatcgaccacaacgacctggcc
gaggggtacgacggtctgatcgacatcaagcgcgggtcgtcgtacgtgaccgtgtcgtgg
aaccacacccacaaccacaccaagaacatgctgctcggacacgacgacagcaacgccgcg
caggacaccggctacctgaaggtgacgtaccacaacaactggttcgaccgcacaccgcag
cgcaacccgcgcgtgcgcttcggcgagccggtccacgtgttcaacaactacttcgtctac
aacaccgacaccggcccggcctgccaggcgaactccggctgcgtggtcgagggcaactac
ttcgaggacgtcgaggagccggtgaccaacagctacgccgggccgtccggccgctgcgtg
gcccgcaacaacgtgttcgtcggtgaatccggccagccggactgcagtgggagcgtgcag
gagccgtcggcgtactacagctacacggtcgcggacccgaacaccgtcaagtcggtcgtg
atggccggcgcgggcaccgggcgactgtga
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