Phytohabitans suffuscus: Psuf_028810
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Entry
Psuf_028810 CDS
T06545
Symbol
pel
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
psuu
Phytohabitans suffuscus
Pathway
psuu00040
Pentose and glucuronate interconversions
psuu01100
Metabolic pathways
psuu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
psuu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Psuf_028810 (pel)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Psuf_028810 (pel)
Enzymes [BR:
psuu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
Psuf_028810 (pel)
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Gene cluster
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Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
BCB85568
UniProt:
A0A6F8YHY0
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Position
complement(3193536..3194744)
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AA seq
402 aa
AA seq
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MLPADDGWAASGPGTTGGSAAAKGDIHTVGTRAELIDALGGDNATNRTNATPKIIIVRGT
VNGFEGLPGRCADLADPAYSLDAYLAAYDPATWGRVNPSGPLEEARVRSVANQTRYTQIN
VGPNTTIIGQRGAKLENLTLMVDSAPNVIVRNINFVDAFDCFPAWSPTDGDLGNWNSQFD
LMSVRRSENVWVDHNTFTDGDNPDSGQPIHFGRPYQVHDGSLDITHTASLVTVSYNRFVS
RDKVMLIGSSNTVGPDVGRLNVTLHHNVFDGTFQRLPRVRFGQVDIYNNYYRLGGDGFSY
ALGVGVQSAIYAENNYFALADGVATEDLLYDWGGTVITEKGSWVQSSGSRLPRPVSLLGA
YNAAHDPDLGADAGWTPTLRHGPVLPTPLVPLAALALAGARL
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
gtgctgccggccgatgatggttgggccgcctccggccccggcaccaccggcggttcagct
gccgccaagggcgacatccacaccgtcggcacgcgcgccgagctcatcgacgcgctcggc
ggcgacaacgccaccaaccgtacgaacgccaccccgaaaatcatcatcgtccggggcacg
gtcaacgggttcgagggactgcccggccgttgcgccgacctcgccgacccggcctactcg
ctcgacgcctacctcgccgcgtacgaccccgcgacctgggggcgggtgaacccgagcggc
ccgctggaggaggcgcgggtgcggtcggtggccaaccagacgcggtacacgcagatcaac
gtcggcccgaacacgacgatcatcgggcagcgcggcgccaagctggaaaacctcacgctg
atggtcgactcggcccccaacgtgatcgtccgcaacatcaacttcgtcgacgcgttcgac
tgcttcccggcctggtcgcccaccgacggcgacctcggcaactggaactcccagttcgac
ctcatgtcggtgcggcgcagcgagaacgtctgggtcgaccacaacacgttcaccgacggc
gacaacccggacagcggccagccgatccacttcggacggccgtaccaggtgcacgacggc
tcgctcgacatcacgcacacggcgagcctggtcaccgtgtcgtacaaccgcttcgtcagc
cgcgacaaggtgatgctgatcggctcgtccaacacggtcggcccggacgtcgggcggctc
aacgtgacgcttcaccacaacgtcttcgacggcaccttccagcggctgccgcgggtgcgc
ttcggccaggtcgacatctacaacaactactaccggctgggcggggacggcttctcgtac
gccctgggtgtcggcgtccagtcggccatctacgcggagaacaactacttcgcgctcgcg
gacggcgtcgccaccgaagacctcctctacgactggggcggcacggtcatcaccgagaag
ggcagctgggtgcagtcgagcggctcgcgcctgccgcgaccggtgagcctgctcggcgcg
tacaacgccgcccacgaccccgacctcggcgcggacgccggctggacgccgaccctgcgc
cacggcccggtgctccccaccccgctcgtcccgctcgccgcgctggcgctggccggcgcg
cgcctgtga
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