Phytohabitans suffuscus: Psuf_030390
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Entry
Psuf_030390 CDS
T06545
Name
(GenBank) hypothetical protein
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
psuu
Phytohabitans suffuscus
Pathway
psuu03030
DNA replication
psuu03430
Mismatch repair
psuu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psuu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Psuf_030390
03430 Mismatch repair
Psuf_030390
03440 Homologous recombination
Psuf_030390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psuu03032
]
Psuf_030390
03400 DNA repair and recombination proteins [BR:
psuu03400
]
Psuf_030390
Enzymes [BR:
psuu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Psuf_030390
DNA replication proteins [BR:
psuu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Psuf_030390
DNA repair and recombination proteins [BR:
psuu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Psuf_030390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DnaX_C
DNAX_ATPase_lid
AAA_16
RuvB_N
AAA_22
AAA_30
Rad17
AAA_14
AAA_18
Mg_chelatase
DEAD
DciA
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
BCB85726
UniProt:
A0A6F8YI13
LinkDB
All DBs
Position
complement(3352443..3354938)
Genome browser
AA seq
831 aa
AA seq
DB search
MALALYRKYRPRTFAEVIGQEHVTEPLSQALRSGRLHHAYLFSGPRGCGKTSSARILARS
LNCAQGPTPEPCGQCDSCKSLATDGGGSIDVIEIDAASHGGVDDARELRERAFFAPATSR
YKIYVIDEAHMVSSAGFNALLKLVEEPPDYVKFIFATTEPEKVLGTIKSRTHHYPFRLIP
PGVLRPYLEQMCVTEGAKVESAVFPLVVRAGGGSARDTLSVLDQLIAGAGSEGVTYTRAV
ALLGVTDVALIDEMCDALAAGDGAAAYGTIDRVAEAGHDPRRFASDLLERLRDLIVLQQV
PDAATKGLIDGPSDQIERMVAQSARLGPATLSRCADIVHNGLVEMRGTTAPRLLLELITA
RMLLPGAEATEDLLQRLERVERRFAIAGSVEDDERTQAAARPRPQTATPAPTRSAPAQTQ
AAPAQAPATQAASAPTQAPPMQAAPAQAAPAQAGPTQAGPGHAGPGHAGPGHAGPGHAGP
GHAGPGHAGPGHAGPGHAGPAHAGPGEAGPTQAAPGQAAPAAQSAPEPAPRQEARREPER
PRAVMDDPATPEPERPGSSLPPQLDVTGVRRAWDEILSMVNSRKKRIAALARNATVRDLE
GDALVLTFQSPALAQMMSKETEVLSDAIYEVLGARWELRCEVAGDQRPAAPSGRPAPAQE
RPAQEKPAPERQAPAPEKRASESRAPESRAPEKKATADWPEPARPGGVAAKPEPRSGDAP
EAPPPVPRAESNGLAAARAAAAGRGTRTPSSAPTADTTWAGEPPYDPEYDGPRTNGAAAS
PPTAAAAYEGFDPGDEPTDDVVDERTARQSSEQQAMQLLQQTFGAEKIGEV
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
gtggcactggcgctctaccgcaagtaccggccccgcacgttcgcagaggtcatcgggcag
gagcacgtcaccgagccgctgtcgcaggctctgcggagcgggcggctccaccacgcctac
ctcttctccgggccacgcgggtgtggcaagacctcaagcgcccgcatcctggcccgctcg
ctcaactgcgcccaggggccgacgccggagccgtgcggtcagtgcgactcgtgcaagtcg
ctggcgaccgacgggggcgggtcgatcgacgtcatcgagatcgacgcggccagtcacggt
ggtgtcgacgacgcgcgtgagctgcgggagcgggcgtttttcgcgccggcgaccagccga
tacaagatatacgtgatcgacgaggcccacatggtctcgtcggcggggttcaacgcgctg
ctcaagctggtcgaagagccgccggactacgtcaagttcatcttcgcgaccaccgagccg
gaaaaggtgctcgggaccatcaagtcgcgcacgcaccattaccccttccggctgattccg
ccgggcgtcctgcgtccttacctggagcagatgtgcgtgaccgagggggcaaaggtcgag
tcggcggtgttcccgctggtggtgcgggccggtggcggcagcgcgcgtgacacgctctcg
gtgctcgaccagctgatcgccggcgcggggtcggagggcgtgacgtacacgcgggcggtc
gcgctgctcggggtgaccgacgtggcgctgatcgacgagatgtgcgacgcgctggcggcg
ggcgacggtgccgcggcgtacgggacgatcgaccgggtcgcggaggcggggcacgatccg
cggcggttcgcgtccgatctgctggagcggctgcgtgacctgatcgtcctgcagcaggtg
cccgacgccgcgaccaaggggctgatcgacgggcccagtgaccagatcgagcggatggtg
gcgcagtcggcgcggctcgggccggccacgctctcgcggtgcgccgacatcgtccacaac
ggactcgtggagatgcgcggcaccacggcgccgcggctgctgctggagctgatcaccgcg
cgcatgctgctgccaggggccgaggcgaccgaagacctgctgcagcggctggagcgggtg
gagcggcggttcgcgatcgcgggcagcgtcgaagacgacgagcgcacccaggccgcggcc
cgacccaggcctcaaaccgccacaccagcaccaacccgatccgcaccggcacagacgcaa
gccgcaccagcacaagcgccggcaacacaagccgcgtcagcgccgacacaagccccacca
atgcaggccgcaccggcacaagccgcaccggcacaagccgggccgacacaagccgggccg
ggacatgccgggccgggacatgccgggccgggacatgccgggccgggacatgccgggccg
ggacatgccgggccgggacatgccgggccgggacatgccgggccgggacatgccgggccg
gcacatgccgggccgggagaagccgggccaacacaggcggcgccgggacaggccgcgccc
gcggcacagagcgcgccagagccagcaccgcggcaagaggcgaggagagagccggagcgg
ccgcgggcggtcatggacgatccggccacgccggagccggagcggccgggcagcagcctg
ccgccgcagctcgacgtaactggcgtgcggcgtgcctgggacgagatcctcagcatggtc
aacagccgcaagaagcggatcgccgccctcgcccgcaacgcgaccgtgcgcgacctcgaa
ggcgacgcgctggtgctgacgttccagtcgccggcgctggcgcagatgatgtccaaggag
accgaggtcctcagcgacgccatctacgaggtgctcggcgcccgctgggagctgcgctgc
gaggtggccggagaccagcgccctgcggcgccgtcgggacggccagcgccagctcaggaa
aggccagcccaggaaaagccagccccggaacgacaagcaccagccccggaaaagcgagca
tcagagagcagagccccggagagcagagcgccggaaaagaaggcgacggccgactggccc
gagcccgcccggccgggcggagtggccgccaagccggagcccaggagcggtgacgcgccg
gaggcgccgccgcccgtcccgcgcgccgagtccaacggactggcggcagcccgcgccgcc
gcggcgggacgtggcacccgtaccccgtcgtctgctcccacggccgacaccacctgggcg
ggtgagccgccctacgacccggagtatgacggcccgcggacgaatggcgccgccgcgagc
ccgcccaccgcggcggccgcgtacgagggtttcgacccgggtgacgagccgaccgacgat
gtcgtcgacgagcgcaccgcgcggcagagcagcgagcagcaggccatgcagttgttacag
cagaccttcggcgccgagaagatcggcgaggtctag
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