Phytohabitans suffuscus: Psuf_033520
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Entry
Psuf_033520 CDS
T06545
Symbol
mutM_1
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
psuu
Phytohabitans suffuscus
Pathway
psuu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psuu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Psuf_033520 (mutM_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psuu03400
]
Psuf_033520 (mutM_1)
Enzymes [BR:
psuu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Psuf_033520 (mutM_1)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Psuf_033520 (mutM_1)
DNA repair and recombination proteins [BR:
psuu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Psuf_033520 (mutM_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
Ribosomal_S13
NFACT_N
DnaG_DnaB_bind
Zn_ribbon_RRN7
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
BCB86039
UniProt:
A0A6F8YJ44
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All DBs
Position
complement(3670001..3670873)
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AA seq
290 aa
AA seq
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MPELPEVEALAAYLRERAAGRRVERIEVAALSALKTYDPPPTAAAGLEITGAGRYGKFLD
VRIGGPSGDDLHLVVHLARAGWLHYRDSFNSGAPLKPGKGPIALRVRLDDGSGFDLTEAG
TKKSLAAYLVKDPALVPGVARLGPDALAADLATFAEAIRGRKGQIKGVLTSQEVLAGVGN
AYSDEILHAARLSPFAITTRLTDEQLAQLHEAVHEILTDAVTRSVGQRAAELKGKKRSGL
RVHARTGLPCPVCGDTVREVSFADSSLQYCPTCQTGGKPLADRRLSRLVR
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagctgcccgaggtggaggcgctcgccgcgtaccttcgcgagcgggccgccgga
cggcgcgtggagcgcatcgaggtcgccgcgttgagcgcgctgaagacgtacgacccgccg
ccgaccgccgccgccggactggagatcaccggcgccggccggtacggcaagttcctcgac
gtgcgcatcggtggtccgtccggcgacgacctgcacctcgtcgtgcacctggctcgggcc
ggctggctgcactaccgcgactcgttcaacagtggagccccgctcaagcccggcaagggg
ccgatcgcgctgcgcgtacggctcgacgacggctccggcttcgacctcaccgaggcgggc
accaagaagagcctcgccgcctacctggtgaaggatccggcgctggtgcccggcgtggcg
cggctcgggccggacgcgctggccgccgacctcgccacgttcgccgaggcgatccgtggc
cgaaagggacagatcaagggcgtgctgacctctcaggaggtgctggccggcgtgggcaac
gcgtactccgacgagatcctgcacgcggccaggctctcccccttcgcgatcacgacccgc
ctcaccgacgagcagctggcccagctgcacgaggcggtacacgagatcctgaccgacgcg
gtgacccgctcggtgggccagcgcgccgccgagctcaagggcaaaaagcgctcgggcctt
cgggtgcacgcgcgcaccgggctgccctgcccggtctgcggcgacacggtccgggaggtg
tcgttcgccgactccagcctccagtactgccccacctgccagaccggcggaaagccactc
gccgatcgcaggctgtcacggcttgtgcgctag
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