Phytohabitans suffuscus: Psuf_035190
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Entry
Psuf_035190 CDS
T06545
Name
(GenBank) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
psuu
Phytohabitans suffuscus
Pathway
psuu00040
Pentose and glucuronate interconversions
psuu01100
Metabolic pathways
psuu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
psuu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Psuf_035190
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Psuf_035190
Enzymes [BR:
psuu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
Psuf_035190
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GFIT
Motif
Pfam:
RicinB_lectin_2
Pectate_lyase_4
Ricin_B_lectin
CDtoxinA
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
BCB86206
UniProt:
A0A6F8YJE8
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Position
3841443..3842909
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AA seq
488 aa
AA seq
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MFKRLTLAAAVVSLAVPAVVVAVSVLPASAATPANGGVYTLAVAASGKCLEVAGGSADNG
GLLQQAACGAGATRQQWRVVSSSAGGFNLVNVNSTRCADVPSSSTTSGIQLQQWGCGDGT
KVNQRWSFAASSAAAGKYRVTSAASGLCVSDRDGSTAGNNPIVQETCADVARMQWLFNQV
GGNPTTPPPGGVPYSNVPDGFAQGVTGGAGGQTVTVTNQSQLNQYVTASAPYVIRVAGTI
NISPKGTELRVASNKSIIGVGTSGHIVGGGFFLGAGVSNVIIRNLTIRDTQMPDDDPGDD
AYDYDAIQMDTANRIWIDHNRLTRMNDGLIDSRKDTTNLTVSWNHLVDHNKTFGIGWTEN
VTARITIHHNWFQNTITRNPSADNIAYCHMYNNYLQNNSSYGNYVRGLTKAVIENSYYEN
VRNPYYVEAGELVNRGNIRVNSPWDSGKVTSKGSAFNPSSFYPYTLHAAADVPALLRQYA
GPQASIGN
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaacgactcacgctggctgccgccgtggtcagcctggcggttccggccgtggtc
gtcgcggtgtcggtgctcccggcgagcgcggcgactccggcgaacggtggtgtctacacg
ctggccgtggccgcttcgggcaagtgcctggaggtggccggcggttcggccgacaacggc
gggctgttgcagcaggccgcgtgcggcgccggtgcgacccggcagcagtggcgggtcgtc
tcgtcgtccgctggtggcttcaatctggttaacgtgaacagcacccgctgcgccgacgtg
ccgtccagctcgaccacctccggcatccagctccagcagtggggctgcggcgacgggacg
aaggtcaaccagcggtggtccttcgcggcttcgagcgccgccgccggcaagtaccgggtc
acgagcgcggcgagcgggctgtgcgtgagcgaccgggacggctcgaccgccggtaacaac
ccgatcgtgcaggagacctgcgcggacgtggcccggatgcagtggctcttcaaccaggtc
ggcggcaacccgaccacaccgccgcccggcggcgtgccgtactcgaacgtgccggacggc
ttcgcccagggcgtcaccggcggcgccggcgggcagaccgtgaccgtcacgaaccagtcg
cagctcaaccagtacgtgaccgcgagcgccccgtacgtgatccgggtggccggcacgatc
aacatcagtcccaaggggactgagctgcgggtcgcctccaacaagtcgatcattggcgtc
ggcaccagcgggcacatcgtgggcggcgggttcttcctcggcgccggggtcagcaacgtg
attatccgcaacctcaccatccgcgacacgcagatgccggacgacgacccgggcgacgac
gcgtacgactacgacgccatccagatggacaccgccaaccgcatctggatcgaccacaac
cgcctgacccgcatgaacgacggcctcatcgacagccgcaaggacaccaccaacctgacc
gtctcgtggaaccacctcgtcgaccacaacaagacgttcggcatcggctggaccgagaac
gtgaccgcgcggatcaccatccaccacaactggttccagaacacgatcacgcgcaacccc
agcgcggacaacatcgcgtactgccacatgtacaacaactacctgcagaacaacagctcg
tacggcaactacgtacgcggcctgaccaaagcggtcatcgagaacagctactacgagaac
gtgcgcaacccgtactacgtcgaggccggcgagctggtcaaccggggcaacatccgggtc
aacagcccgtgggacagcggaaaggtgacctcgaagggctccgcgttcaacccgtccagc
ttctacccgtacaccctccacgccgccgccgacgtgcccgcgctgctgcgccagtacgcc
ggaccgcaggcgagcatcggcaactag
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