Phytohabitans suffuscus: Psuf_037770
Help
Entry
Psuf_037770 CDS
T06545
Name
(GenBank) putative DNA helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
psuu
Phytohabitans suffuscus
Pathway
psuu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
psuu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Psuf_037770
09124 Replication and repair
03420 Nucleotide excision repair
Psuf_037770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psuu03021
]
Psuf_037770
03400 DNA repair and recombination proteins [BR:
psuu03400
]
Psuf_037770
Enzymes [BR:
psuu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Psuf_037770
Transcription machinery [BR:
psuu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Psuf_037770
DNA repair and recombination proteins [BR:
psuu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Psuf_037770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
BCB86464
UniProt:
A0A6F8YK09
LinkDB
All DBs
Position
complement(4097952..4099595)
Genome browser
AA seq
547 aa
AA seq
DB search
MSGGGPLIVQSDKTLLLEVDHPDALACRMAIAPFAELERSPEHVHTYRLTPLGLWNARAA
GHDAEGVVDALLRFSRYPVPHALLVDVAETMDRYGRLQLVNHPTHGLVLRGLDRAVLVEV
AKSKKLAGMLGAKIDDDTIAVHPSERGRLKQGLLKLGWPAEDLAGYVDGEAHPIALAQDG
WQLRSYQQEAVDHFWAGGSGVVVLPCGAGKTLVGAAAMAQASATTLILVTNTVAGRQWKR
ELLARTSLTEEEIGEYSGERKEIRPVTIATYQVLTTRRSGSFTHLDLFNARDWGLVIYDE
VHLLPAPIFRFTADLQARRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDIEAQGWIA
PADCTEVRVTLSDEERMAYAVSESEERYRFAATARSKLPVVKALVNRHPDDQVLVIGAYI
DQLHQLGEALNAPIIQGSTTNKERERLFDEFRSGKLRTLVISRVGNFSIDLPEVAVAVQV
SGTFGSRQEEAQRLGRVLRPKSDGRQAHFYTVVSRDTIDTEYAAHRQRFLAEQGYAYTIV
DADDVLA
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
ttgagcggcggcggaccattgatcgtgcagtcggacaagaccctgctgctggaggtcgac
cacccggacgcgctggcctgccgcatggcgatcgcgccgttcgcggagctggagcgctcg
ccggagcacgtgcacacgtaccggctgaccccgctcgggctgtggaacgcgcgggccgcg
gggcacgacgccgagggcgtggtcgacgcgctgctgcgcttctcccgctacccggtgccg
cacgcactgctggtcgacgtggccgagaccatggaccggtacgggcggctccagctggtc
aaccatccgacgcacgggctggtgctgcgcgggctggaccgggcggtgctggtcgaggtc
gccaagtcgaagaagctcgccggcatgctcggcgccaagatcgacgacgacacgatcgcg
gtgcacccgtccgagcgcgggcggctcaagcaggggctgctcaagctcggctggccggcc
gaagatctcgccggctacgtcgacggcgaggcgcacccgatcgcgctggcgcaggacggc
tggcagctccggtcgtaccagcaggaggcggtcgaccacttctgggccggcggctcgggc
gtggtcgtgctcccctgcggcgcgggcaagacgctggtcggcgccgccgccatggcccag
gcgtcggccaccacgctcatcctggtcaccaacacggtcgccggccgccagtggaagcgc
gagctgctggcccgcacctcgctcaccgaggaggagatcggcgagtactcgggcgagcgc
aaggagatccgcccggtgaccatcgccacgtaccaggtgctcaccacccggcgcagcggc
tcgttcacccacctcgacctcttcaacgcgcgcgactggggcctggtcatctacgacgag
gtgcacctgctgcccgcgccgatcttccgcttcacggccgacctccaggcccgccgccgg
ctcggcctcaccgccaccctggtacgcgaggacgggcgcgagggcgacgtcttctcgctg
atcggcccgaagcggtacgacgcgccgtggaaggacatcgaggcgcagggctggatcgcg
ccggccgactgcaccgaggtgcgggtgaccctctccgacgaggagcgcatggcgtacgcg
gtgtccgagtcggaggagcgctaccgcttcgccgccaccgcccgctccaagctgcccgtg
gtcaaggcgctggtcaaccgccacccggacgaccaggtgctggtgatcggggcgtacatc
gaccagctccaccagctcggcgaggcgctgaacgcgccgatcatccagggctcgaccacc
aacaaggagcgcgagcggctcttcgacgagttccggtcgggaaagctccgcacgctggtg
atctcccgggtcggcaacttctccatcgacctgcccgaggtggcggtcgcggtccaggtc
tccggcacgttcggctcccgccaggaggaggcgcagcgcctgggtcgggtgctgcgcccc
aagtccgacgggcggcaggcgcacttctacacggtggtctcccgggacacgatcgacacc
gagtacgcggcgcaccgccagcggttcctggccgaacagggctacgcctacacgatcgtg
gacgccgacgacgtgctcgcctga
DBGET
integrated database retrieval system
