Phytohabitans suffuscus: Psuf_041380
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Entry
Psuf_041380 CDS
T06545
Symbol
groL1
Name
(GenBank) 60 kDa chaperonin 1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
psuu
Phytohabitans suffuscus
Pathway
psuu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psuu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Psuf_041380 (groL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psuu03019
]
Psuf_041380 (groL1)
03110 Chaperones and folding catalysts [BR:
psuu03110
]
Psuf_041380 (groL1)
03029 Mitochondrial biogenesis [BR:
psuu03029
]
Psuf_041380 (groL1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psuu04147
]
Psuf_041380 (groL1)
Enzymes [BR:
psuu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Psuf_041380 (groL1)
Messenger RNA biogenesis [BR:
psuu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Psuf_041380 (groL1)
Chaperones and folding catalysts [BR:
psuu03110
]
Heat shock proteins
HSP60 / Chaperonin
Psuf_041380 (groL1)
Mitochondrial biogenesis [BR:
psuu03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Psuf_041380 (groL1)
Exosome [BR:
psuu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Psuf_041380 (groL1)
Exosomal proteins of other body fluids (saliva and urine)
Psuf_041380 (groL1)
Exosomal proteins of breast cancer cells
Psuf_041380 (groL1)
Exosomal proteins of colorectal cancer cells
Psuf_041380 (groL1)
Exosomal proteins of bladder cancer cells
Psuf_041380 (groL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
BCB86825
UniProt:
A0A6F8YL19
LinkDB
All DBs
Position
4457277..4458932
Genome browser
AA seq
551 aa
AA seq
DB search
MAKILSFSDDARHQLEHGVNALADAVKVTLGPRGRNVVLDKKFGAPTITNDGVTIAKEIE
LANPYQNLGAQLVKEVATKTNDVAGDGTTTATVLAQAMVREGLRNVAAGANPAGLKRGID
AAAEAVSKALLAKAIEVADKQSIAHVATISAQDATIGDLIAEAMEKVGRDGVITVEEGST
LATELEVTEGLQFDKGFISPHFVTDPDAQESVLEDAYVLITTQKISSVEELLPLLEKVLQ
ASKPLLIIAEDVEGQALATLVVNAIRKTFKVCAVKAPGFGDRRKAMLQDMAILTGGGVVA
PELGYKLDSVGLEVLGTARRIVVDKDNTTIIEGGGNDAEVTDRVSQIRKEIEASDSDWDR
EKLAERLAKLSGGIAVIKAGGATEVELKERKHRIEDAISATKAAVEEGTVPGGGAALVQV
APQLDAGLDFAESKATADERVGVSIVRKALDEPLRWIAQNAGHDGYVVVQKVRGNDWGIG
LDAAIGDYVDLAKSGIIDPVKVTRNAVTNAASIAGLLLTTESLIVEKPEKAEPAQGGGHG
HGHGHQHGPGF
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcctgagtttctcggacgacgcccggcatcagcttgagcacggcgtcaac
gcgctggcggacgcggtcaaggtcactctcggcccgcgcgggcgcaacgtcgtgctggac
aagaagttcggcgctccgacgatcacgaacgacggcgtgacgatcgccaaggagatcgag
ctcgccaacccgtaccagaacctcggcgcgcagctggtcaaggaggtggcgacgaagacc
aacgatgtcgccggcgacgggaccaccaccgcgaccgtgctcgcccaggccatggtccgc
gagggcctgcgcaacgtggccgccggcgccaacccggccggcctcaagcgcggcatcgac
gccgcggccgaggccgtgtcgaaggcgctgctggccaaggcgatcgaggtcgccgacaag
cagtccatcgcccacgtcgccaccatctcggcgcaggacgccacgatcggtgacctgatc
gccgaggcgatggagaaggtcggccgcgacggtgtcatcaccgtcgaggagggttccacc
ctcgccaccgagcttgaggtcaccgagggcctccagttcgacaagggcttcatctcgccg
cacttcgtgaccgacccggacgcgcaggagtcggtgctcgaagacgcgtacgtgctgatc
acgacgcagaagatctcctcggtggaggagctgctgccgctcctggagaaggtgctccag
gccagcaagccgctcctgatcatcgccgaggacgtcgagggccaggctctggccacgctg
gtggtcaacgcgatccgcaagaccttcaaggtctgcgcggtcaaggcccccggcttcggc
gaccgccgcaaggcgatgctccaggacatggccatcctcaccggcggtggggtggtcgcg
cccgagctcggatacaagctcgactcggtcggcctggaggtgctgggcaccgcccggcgc
atcgtcgtcgacaaggacaacaccacgatcatcgagggcggcggcaacgacgccgaggtc
accgaccgggtctcgcagatccgcaaggagatcgaggcgtcggactccgactgggaccgg
gagaagctcgccgagcggctggccaagctctccggcggcatcgcggtgatcaaggccggc
ggcgcgaccgaggtcgagctcaaggagcgcaagcaccgcatcgaggacgccatctcggcg
accaaggccgcggtcgaggagggcaccgtgccgggcggcggcgccgcgctggtgcaggtg
gccccgcagctcgacgccgggctcgacttcgccgagagcaaggcgacggccgacgagcgg
gtcggcgtgtcgatcgtgcgcaaggcgctcgacgagccgctgcgctggatcgcccagaac
gccggccacgacggctacgtcgtcgtgcagaaggtgcgcggcaacgactggggcatcggc
ctcgacgcggccatcggcgactacgtcgacctggccaagtccggcatcatcgacccggtc
aaggtgacccgcaacgcggtcaccaacgccgcctcgatcgccggtctcctgctcaccacg
gagagcctcatcgtggagaagccggagaaggcggagccggcccagggcggcggccacggc
cacggtcacggccaccagcacgggcccggcttctga
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