Phytohabitans suffuscus: Psuf_052000
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Entry
Psuf_052000 CDS
T06545
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
psuu
Phytohabitans suffuscus
Brite
KEGG Orthology (KO) [BR:
psuu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psuu03016
]
Psuf_052000
Enzymes [BR:
psuu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Psuf_052000
Transfer RNA biogenesis [BR:
psuu03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Psuf_052000
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
BCB87887
UniProt:
A0A6F8YP23
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All DBs
Position
complement(5571738..5572862)
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AA seq
374 aa
AA seq
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MARFAAGTGPVAVDAERASGYRYTQRAYLVQLRRAGAGSVLIDPLPLGDLRTLDEAIADA
EWVLHAASQDLPCLADLGLRPRRLFDTELAARLAGFERVGLAALTEQLLGYTLEKHHSAA
DWSTRPLPESWLTYAALDVELLTDLRDKLAAELATQGKDDWAAEEFAALVASGAQPPRQR
PDPWRRTSGIHRIRGARAQARVRAMWYARDEIAARRDSAPGRVLPDAAIIAAAELDPKDE
RTLLTLPGFGGRSVRRLARTWIDALTKARELPDDMLPVAPPLDGPPPPHRWAERDPVAAA
RLARCREVVTTAAAAHTLPPENLITPDSVRRLAWTPPEEITPDTVAATLRGYGARAWQVG
LIADGLAVALRDPE
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
gtggcccgcttcgccgccgggaccggcccggtagccgtggacgccgagcgcgcctccggc
taccggtacacccagcgcgcctacctcgtgcagctgcggcgggccggcgcgggcagcgta
ctcatcgatccgcttcccctcggtgacctgcgcacgctcgacgaggccatcgccgacgct
gaatgggtcttgcacgccgcgagccaggatctgccctgtctggccgacctcggtctgcga
ccccgtcggcttttcgacaccgaattggccgctcggctggccggattcgagcgggtcggc
ttggcggcactgaccgaacagctactcgggtacacgctcgaaaagcaccactcggccgcc
gactggtccacccggccgctgcccgagtcgtggctgacgtacgcggcgctggacgtcgag
ctccttaccgacctgcgcgacaagctggccgccgagctcgccacgcagggcaaggacgac
tgggcggccgaggagttcgcggccctggtcgcctccggcgcgcagccgccccggcagcgc
cccgacccgtggcggcgcacctccggcatccaccgcatccggggcgcgcgggcacaggcc
cgggtgcgcgcgatgtggtacgcgcgggacgagatcgccgcgcgccgcgactcggcgccc
ggccgggtgctgccggacgcggcgatcatcgcggccgccgagctcgaccccaaggacgag
cggacgctgctcacgctccccggcttcggcgggcgctcggtgcggcggctggcccgcacc
tggatcgacgcgctgaccaaggcccgcgagcttcccgacgacatgctgccggtggccccg
ccgctggacggtcccccaccaccgcaccggtgggccgagcgcgacccggtcgcggccgcc
cgcctggcccggtgccgcgaggtggtcaccacggccgccgccgcgcacacgctcccgccg
gaaaacctgatcacacccgattcggtacgccggctggcctggacgccgcccgaggagatc
acgccggacacggtggcggcgacgctgcgcgggtacggcgcgcgggcctggcaggtcggg
ctcatcgcggacggtctggcggtggcgctgcgcgatccggagtga
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