Phytohabitans suffuscus: Psuf_055710
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Entry
Psuf_055710 CDS
T06545
Name
(GenBank) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
psuu
Phytohabitans suffuscus
Pathway
psuu00040
Pentose and glucuronate interconversions
psuu01100
Metabolic pathways
psuu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
psuu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Psuf_055710
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Psuf_055710
Enzymes [BR:
psuu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
Psuf_055710
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
3keto-disac_hyd
Laminin_G_3
Beta_helix
Glyco_hydro_59_C
SO2946-like_C
Laminin_G_2
Glyco_hydro_32C
Motif
Other DBs
NCBI-ProteinID:
BCB88258
UniProt:
A0A6F8YQR9
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Position
complement(5985894..5987450)
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AA seq
518 aa
AA seq
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MPHRGRRALLAAALAGAVAAALVVSGVPSAHAATLFSADFTGGASGWTRSGGSWSVVTDG
SAVYRQSGTGSDARALAGSGSWTDYTIEARVKPTAFNGSARHAGVIARAQSTSAYYYLAL
TNTGEVRLGRRGSGGHTTLASASATVSAGTWYRLRLEAAGTTLRGFVDGRLVATAADSAY
SAGTVGLATYYSSASFDDVLVTDSAGPTPTTTAPTPGVTTSPPPQPVPGQADGHATGTTG
GAGGPTVTVTTAAELARYAGANTPYVIRVAGRIAVDGMVTVVANKSVIGVGSTAEIVGGG
LQLGTTTRPGDNVIIRNITFRDASDDSVSVHNGSHHVWIDHNEFYPGFDGSVDVKRQSTA
VTVSWNRFHATDKSMLVGHSDSFPDDIGYLKVTYHHNYFDGSNQRHPRVRFGEPVHVYNN
YYRGIGLYGVASTENAGVLVEANYFEDVAYPCHSVSGYADSAPGRLAERGNVFVRSGTCE
SGGTVADPRAYYSYTPDSAASVPALVTAGAGVGRIPGA
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgccccacagaggacggagggcgctgctcgccgcggccctcgccggcgcggtggccgcc
gcgctcgtcgtgtccggcgtgccgtcggcgcacgccgccacgctcttcagcgccgacttc
accggtggcgccagcggctggacccgctccggcgggagctggtccgtcgtcaccgacggc
tcggccgtctaccgccagtccggcaccggcagcgacgcccgcgcgctcgccgggtccggc
tcgtggaccgactacacgatcgaggcgcgggtcaagcccaccgccttcaacggctcggcc
cggcacgccggcgtcatcgcccgcgcgcagagcacgagcgcctactactacctcgcgctg
accaacacgggcgaggtgcggctcggccgccgcggctccggcggccacacgacgctcgcg
tcggcgtccgcgacggtctcggccggcacgtggtaccggctccgcctcgaagccgccggc
accacgctgcgcggcttcgtcgacgggcggctcgtcgcgaccgccgccgacagcgcgtac
tccgccggcacggtcggcctcgccacctactactccagcgcctccttcgacgacgtgctg
gtgaccgactcggccggccccacgccgacgaccaccgccccgacgccgggcgtgaccacc
tcgccgccgccgcagccggtgcccggccaggcggacgggcacgcgaccggcaccacgggc
ggcgcgggcggccccaccgtcaccgtgacgaccgcggcggagctggcgcggtacgcgggc
gccaacaccccgtacgtcatccgggtcgccggccggatcgcggtcgacggcatggtcacg
gtggtggcgaacaagagcgtcatcggcgtcggatcgaccgccgagatcgtcggcggcggg
ctccagctgggcacgaccacgcgccccggcgacaacgtcatcatccgcaacatcacgttc
cgcgacgcctcggacgactcggtgagcgtccacaatggatcacatcacgtgtggatcgac
cacaacgagttctaccccggcttcgacggctcggtcgacgtcaagcgccagtcgacggcc
gtgaccgtctcgtggaaccggttccacgccaccgacaagagcatgctggtcggccactcc
gactcgttcccggacgacatcggctacctgaaggtcacctaccatcacaactacttcgac
ggctccaaccagcgccacccgcgggtgcgcttcggcgagccggtccacgtctacaacaac
tactaccgcggcatcggcctctacggcgtcgcgtccaccgagaacgcgggcgtgctcgtc
gaggcgaactacttcgaggacgtcgcatacccctgccactccgtcagcgggtacgccgac
tccgcacccggccgcctggccgagcggggcaacgtcttcgtccgatccggcacctgcgag
agcggcggcacggtcgccgaccctcgcgcctactactcctacacgccggacagcgccgcc
tccgtacccgcgctggtcacggcaggcgcgggtgtggggcgcatccccggcgcctga
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