Phytohabitans suffuscus: Psuf_062170
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Entry
Psuf_062170 CDS
T06545
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
psuu
Phytohabitans suffuscus
Pathway
psuu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
psuu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Psuf_062170 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psuu03400
]
Psuf_062170 (uvrB)
DNA repair and recombination proteins [BR:
psuu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Psuf_062170 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Psuf_062170 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_16
AAA_22
DUF87
AAA_5
HerA_C
TrwB_AAD_bind
UB2H
AAA_7
Motif
Other DBs
NCBI-ProteinID:
BCB88904
UniProt:
A0A6F8YS24
LinkDB
All DBs
Position
6687047..6689176
Genome browser
AA seq
709 aa
AA seq
DB search
MGLDIPRLDGRFQVISDFKPSGDQPAAIDDLERRVRRGDRHTVLMGATGTGKSATTAWLV
ERMQRPTLVLAHNKTLCAQLAKEFRELMPNNAVEYFVSYYDYYQPEAYIPQTDTYIEKDS
SVNEEVERLRHSATMSLLTRRDVIVVATVSAIYGLGTPSEYLDRSVRVRVGEEVDRDKLL
RRLVDIQYTRNDMSFSRGTFRVRGDTLEIIPAYEELAVRIELFGDEVEKLYYLHPLTGDV
VKEVDQLLIFPATHYAAGPERMERALRGIEAELAERLAELEGQGKLLEAQRLRMRTTYDI
EMMRQVGFCNGIENYSMHIDGRSHGDPPHCLLDYFPDDFMTVIDESHQTIPQIGAMYEGD
ASRKRLLVEHGFRLPSAADNRPLRFDEFLERVGQMVFLSATPGPWELQHAGGEFVEQVIR
PTGLVDPEVRIKPTKGQIDDLMHEIQLRTERDERVLVTTLTKKMAEDLTDYLLEHGIRVR
YLHSEVDTLRRVELLRELRKGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSGTS
LIQTIGRAARNVSGQVHMYADKITPSMATAIEETDRRRAKQVAYNEANGISPEPLRKKIH
DILDDIYREADDTEGALGGHGPGGHVIGGSGRQMTRGKAPVPQTRSRGKAATPSREGMAR
ADLAQLIQDLNDQMLAAARELQFELAARIRDEVHELKKELRGMDAAGVK
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggggctcgacatcccgcggctcgacggtcgcttccaggtcatcagcgacttcaagccc
tccggcgaccagccggcagctatcgacgaccttgagcgtcgggtgcgccgtggcgaccgg
cacacggtgctcatgggcgccaccggcacgggcaagagcgcgaccaccgcgtggctcgtc
gagcgcatgcagcgccccacgctggtgctggcccacaacaagaccctgtgcgcgcagctc
gccaaggagttccgcgagctgatgcccaacaacgcggtggagtacttcgtctcgtactac
gactactaccagcccgaggcgtacatcccgcagacggacacatacatcgaaaaggactcc
tcggtcaacgaggaggtcgagcggctgcgccactcggcgacgatgtcgctgctcacccgg
cgcgacgtgatcgtggtggccacggtctccgcgatctacggcctgggcaccccgtcggag
tacctggaccggtccgtgcgcgtccgggtcggcgaggaggtcgaccgcgacaagctgctg
cgccgcctggtcgacatccagtacacgcgcaacgacatgtcgttcagccggggcacgttc
cgggtccgcggcgacaccctcgagatcatcccggcgtacgaggagctggccgtccggatc
gagctcttcggcgacgaggtggagaagctctactacctgcacccgctcaccggcgacgtg
gtcaaggaggtcgaccagctgctcatcttcccggccacccactacgcggccgggccggag
cggatggagcgggcgctgcgcggcatcgaggccgagctggccgagcggctcgccgagctg
gaggggcagggcaagctgctggaggcgcagcggctgcgcatgcgcacgacgtacgacatc
gagatgatgcgccaggtcggcttctgcaacggcatcgaaaactactcgatgcacatcgac
ggccggtcgcacggcgacccgccgcactgcctgctcgactacttccccgacgacttcatg
acggtgatcgacgagtcgcaccagacgatcccgcagatcggcgcgatgtacgagggcgac
gcctcgcgcaagcggctgctggtcgagcacggcttccggctgccgagcgcggccgacaac
cggccgctgcggttcgacgagttcctggagcgggtcgggcagatggtgttcctgtccgcg
acgccggggccgtgggagctgcagcacgcaggcggcgagttcgtcgagcaggtgatccgc
ccgaccggcctggtcgaccccgaggtgcggatcaagccgaccaagggccagatcgacgac
ctgatgcacgagatccagctgcgcaccgagcgcgacgagcgggtgctggtcacgacgctg
accaagaagatggccgaagacctcaccgactacctgctggagcacggcatccgggtgcgc
tacctgcactccgaagtggacacgctgcgccgggtcgagctgctgcgcgagctgcgcaag
ggcgactacgacgtgctggtcggcatcaacctgctgcgcgagggcctcgacctgcccgag
gtgtcgctggtcgcgatcctcgacgccgacaaggagggcttcctgcgcagcggcacgtcg
ctgatccagaccatcggccgcgccgcgcgtaacgtctccggccaggtccacatgtacgcc
gacaagatcaccccgtcgatggccaccgcgatcgaggagaccgaccggcggcgggccaag
caggtggcgtacaacgaggccaacggcatctcgcccgagccgctccgcaagaagatccac
gacatcctcgacgacatctaccgcgaggcggacgacaccgagggggcgctcggcggccac
gggccgggcggccacgtgatcggcggctcggggcggcagatgacgcggggcaaggcgccg
gtgccgcagacccgttcgcggggcaaggcggccaccccgtcccgcgagggcatggcccgc
gccgacctggcccagctcatccaggacctcaacgaccagatgctggccgccgcgcgcgag
ctgcagttcgagctggccgcccggatccgcgacgaggtccacgagctgaagaaggagctg
cgcgggatggacgcggccggggtgaagtag
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integrated database retrieval system
