Pseudoxanthomonas suwonensis J1: WQ53_00100
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Entry
WQ53_00100 CDS
T04241
Name
(GenBank) DEAD/DEAH box helicase
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
psuw
Pseudoxanthomonas suwonensis J1
Brite
KEGG Orthology (KO) [BR:
psuw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psuw03009
]
WQ53_00100
Enzymes [BR:
psuw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
WQ53_00100
Ribosome biogenesis [BR:
psuw03009
]
Prokaryotic type
rRNA helicases
WQ53_00100
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AKC85415
UniProt:
A0A0E3ULS8
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All DBs
Position
27258..28634
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AA seq
458 aa
AA seq
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MTDFASLPLSPALRPGLDALGYTTATPIQAASLPPILEGRDLIAQAPTGSGKTAAFGLGL
LQRLDPAVTRAQALVLCPTRELADQVGKQLRKLATGIPNLKLSILTGGTALEPQITSLQA
HDPQVVVGTPGRVQELARKRVLHLGGVRTLVLDEADRMLDMGFEEPVREIAGRCDKHRQT
LLFSATFPEEIRELARQLLREPVEVAHEGTEGAPAIEQRFFDVDPAHRQKAVAGLLLRYR
PESALVFCNTRKEVDEVAGSLRQFGFSALALHGDMEQRDRDEVLLQLANRSCNVLVASDV
AARGIDVEDLAAVLNYELPTDVDAYRHRIGRTGRAGRRGLALSLVAPRENARAEMVAAAQ
DAPPRRESSPLATGRPAQPAQAPMTTLRIDGGKTDKLRPGDILGALTGEAGLPASAIGRI
AIHATRSYVAIAREEAPRALKRLEAGKIKGRRFRVRPL
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacttcgcctcgctgccgctgtcccctgccctccgtcccggcctggatgcgctc
ggctacaccaccgccaccccgatccaggccgcgtcgctgccgccgatcctcgaaggccgc
gacctgatcgcgcaggcgccgaccggcagcggcaagaccgccgccttcggcttgggcctg
ctgcagcggctggacccggcggtaacccgcgcacaggcgctggtgctgtgcccgacccgc
gaactggccgaccaggtcggcaagcagctgcgcaagctggccaccggcatccccaacctc
aagctgagcatcctcaccggcggcaccgcgctggagccgcagatcacctcgctgcaggcc
cacgatccgcaggtggtggtcggcacccccggccgggtgcaggaactggcccgcaagcgc
gtgctgcacctgggcggcgtgcgcacgctggtgctggacgaggccgaccgcatgctcgac
atgggcttcgaggagccggtgcgcgagatcgccgggcgctgcgacaagcaccggcagacc
ctgctgttctcggccacgttcccggaagagatccgcgaactggcccggcaactgctgcgc
gaaccagtggaagtggcgcacgagggcaccgaaggcgcgccggcgatcgaacagcgcttc
ttcgacgtcgatccggcgcaccggcagaaggcggtagccggcctgctgctgcgctaccgc
ccggagtcggcgctggtgttctgcaacacccgcaaggaggtggacgaagtggccggctcg
ctgcgccagttcggcttctcggcgctggcgctgcacggcgacatggaacagcgcgaccgc
gacgaggtgctgctgcagctggccaaccgcagctgcaatgtcctggtcgccagcgacgtg
gccgcgcgcggcatcgacgtggaagacctggccgcggtgctcaactacgaactgccgacc
gacgtggacgcctaccgccaccgcatcggccgcactggccgcgccggccgccgcggcctg
gcgctgagcctggtggcgccgcgcgagaacgcgcgcgcggagatggtcgccgccgcccag
gacgcaccgccgcggcgcgagtcctcgccgctggccaccggccggcccgcgcagccggcg
caggcgccgatgaccaccctgcgcatcgacggcggcaagaccgacaagctgcgtccgggc
gacatcctcggtgcgctgaccggcgaggccgggttgccggccagcgcgatcggcaggatc
gcgatccatgccacccgctcgtacgtggccatcgcccgcgaagaggcaccgcgggcgctg
aagcggctggaagccggcaagatcaagggccgccgcttccgcgtgcgtccgctctga
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