Pseudoxanthomonas suwonensis J1: WQ53_01770
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Entry
WQ53_01770 CDS
T04241
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
psuw
Pseudoxanthomonas suwonensis J1
Brite
KEGG Orthology (KO) [BR:
psuw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psuw03009
]
WQ53_01770 (rimO)
Enzymes [BR:
psuw01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
WQ53_01770 (rimO)
Ribosome biogenesis [BR:
psuw03009
]
Prokaryotic type
ribosomal protein modification factors
WQ53_01770 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
YajR_YAM
PrmA
Motif
Other DBs
NCBI-ProteinID:
AKC85683
UniProt:
A0A0E3Z1K0
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All DBs
Position
complement(413832..415232)
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AA seq
466 aa
AA seq
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MSLQNPKVGFVSLGCPKALVDSERILTQLRVEGYAIVPSYDDADVVVVNTCGFIDSAVAE
SLDAIGEAMNENGKVIVTGCLGKRSELIREQYPDVLAISGPQDYGSVMEAVHAALPPRHD
PFVDLVPRGRLGVRDEEDVGIKLTPHHYAYLKISEGCNHRCSFCIIPSMRGDLVSRPVDE
VLREAERLVKGGVRELLVVSQDTSAYGVDLKYAARQWRGREYQTRMKALCEGLSELDAWT
RLHYVYPYPHVDDVIPLMAEGKVLPYLDIPFQHASPRVLKLMKRPGAVDKTLERVQRWRA
ACPQLTLRSTFIVGFPGETEAEFEELLDFLDEAQLDRVGAFAYSPVDGAAANALPDPVPE
EVKQERLARFMERQGEISAARLEAKVGTVQRCLVDLLDGELALARSMADAPEIDGTVQIQ
DGRDAGLQPGEFVDVRIMGSDEHDLYGEVEYAEASGDSAPLGLRLV
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgcagaaccccaaggtcggcttcgtcagcctcggctgcccgaaggcgctggtc
gactccgaacgcatcctcacccagctgcgggtcgagggctacgccatcgtgcccagctac
gacgacgccgacgtggtggtggtcaacacctgtggcttcatcgactcggcggtggccgag
tcgctggacgcgatcggcgaggcgatgaacgagaacggcaaggtcatcgtcaccggctgc
ctgggcaagcgctcggaactgatccgcgagcagtacccggacgtgctggcgatctccggc
ccgcaggactacggcagcgtgatggaggcggtgcacgcggcgctgccgcccaggcacgat
ccgttcgtcgatctggttccccgcggacgccttggcgtccgcgatgaagaggatgtcggg
atcaagctcacgccgcaccactacgcctacctgaagatttccgagggctgcaaccaccgc
tgcagcttctgcatcatcccctcgatgcgcggcgacctggtctcgcgcccggtggacgag
gtgctgcgcgaggccgagcggctggtcaagggcggcgtgcgcgaactgctggtggtctcg
caggacacctcggcctatggcgtggacctgaagtacgccgcgcggcagtggcgcggccgc
gagtaccagacccggatgaaggcgttgtgtgagggcctgtccgaactggatgcgtggacc
cgcctgcactacgtctacccgtatccgcacgtggacgacgtcatcccgctgatggccgag
ggcaaggtccttccctacctggacatcccgttccagcacgccagcccgcgcgtgctcaag
ctgatgaagcgcccgggcgcggtcgacaagaccctcgagcgcgtgcagcgctggcgcgcg
gcgtgcccgcagctgaccctgcgctcgaccttcatcgtcggcttccccggcgagaccgag
gccgagttcgaggaactgctcgacttcctcgacgaggcgcagctggaccgggtcggtgcc
ttcgcctattcgccggtggatggcgcggcggccaacgcgctgcccgacccggtacccgaa
gaggtcaagcaggaacgcctggcccgcttcatggagcgccagggcgagatttccgccgcg
cgtctggaagccaaggtcggcaccgtgcagcgctgcctggtcgacctgctcgatggcgag
ctggcgctcgcccgctcgatggccgatgccccggagatcgacggcaccgtgcagatccag
gacggacgcgatgccggcctgcagccgggcgagttcgtcgacgtgcggatcatgggcagc
gacgagcacgacctgtacggcgaggtggagtatgccgaggcgtcgggcgattccgcgccg
ctggggctgcgcctggtctag
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