Pseudoxanthomonas suwonensis J1: WQ53_06715
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Entry
WQ53_06715 CDS
T04241
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
psuw
Pseudoxanthomonas suwonensis J1
Brite
KEGG Orthology (KO) [BR:
psuw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psuw03032
]
WQ53_06715
03400 DNA repair and recombination proteins [BR:
psuw03400
]
WQ53_06715
Enzymes [BR:
psuw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
WQ53_06715
DNA replication proteins [BR:
psuw03032
]
Prokaryotic type
DNA Topoisomerases
WQ53_06715
DNA repair and recombination proteins [BR:
psuw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
WQ53_06715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AKC86504
UniProt:
A0A0E3Z163
LinkDB
All DBs
Position
1590449..1592986
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AA seq
845 aa
AA seq
DB search
MPKHLLIVESPAKAKTINKYLGKDFTVLASYGHVRDLVPKEGAVDPERGFAMRYDLIDKN
EKHVEAIARAAKAADDIWLATDPDREGEAISWHIAEILKERGLLKDKPLHRVVFTEITPR
AIKEAMTQPRPIAGDLVDAQQARRALDYLVGFNLSPVLWRKVQPGLSAGRVQSPALRMIV
EREEEIEAFETREYWTIAAELAHASQPFGAKLVKLDGKKFEQFTVTDGETAEAARLRIQQ
AAAGALHVTDVASKERKRRPAPPFTTSTLQQEASRKLGFTTRKTMQVAQKLYEGVTLGEE
GTVGLISYMRTDSVSLSQEALAEIRDVIARDYGTASVPDKPNVYQTKSKNAQEAHEAVRP
TSALRTPAQVSRFLTDDERKLYDLVWKRAVASQMVPATLNTVSVDLAAGSEHAFRASGTT
IVFSGFLAVYEEGKDSKAAEDEDEGRKLPLLKPGERVPLDRIHADQHFTQPPPRFTEAAL
VKALEEYGIGRPSTYASIIQTLLFRKYAEMEGRAFKPTDVGRAVSKFLSGHFARYVDYDF
TAKLEDELDAVSRGEEEWVPLMEKFWGPFKELVEDKKESLDRTDAGSSRSLGTDPKSGKE
VSARIGRFGPMVQIGTVEDEEKPKFASLQPGQSIYSISLEDALKLFDMPRVLGESNGEQV
SVGIGRFGPFAKRGGTYASLKKEDDPFKIDLARAVFLVEEKEEIARNRVIKEFPGSDIQV
LNGRFGPYISDGKLNGKIPKDREPASLTLAEVQQLLADTGKPARRGFGAKTAQKGAKTAA
RKAAAKEPAPAKTPQKGAKAPARKAPAKKAAAKKTPTKKAAGKTAAKKAPAKKVARAAAD
DAPPF
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagcacctgctcatcgtcgaatcgccggccaaggccaagacgatcaacaaatac
ctcggcaaggacttcaccgtcctggcctcctatgggcacgtccgcgacctggtaccgaag
gagggcgcagtcgatcccgagcgcggcttcgccatgcgctacgacctgatcgacaagaac
gagaagcacgtggaggcgatcgcccgcgcggccaaggccgccgacgacatctggctggcg
accgacccggaccgcgagggcgaggcgatcagctggcacatcgccgagatcctgaaggaa
cggggcctgctcaaggacaagccgctgcaccgggtggtgttcaccgagatcactccgcgc
gcgatcaaggaagcgatgacccagccgcgcccgatcgccggcgacctggtcgacgcccag
caagctcgaagggcgctcgactacctggtcggcttcaacctgtcgccggtgctgtggcgc
aaggtgcagccgggcctgtcggccggccgcgtgcagtcgccggcgctgcgcatgatcgtc
gagcgcgaggaggagatcgaggcgttcgagacgcgcgagtactggaccatcgccgccgaa
cttgcgcacgcctcgcagccgttcggcgccaagctcgtcaagctcgacggcaagaagttc
gagcagttcaccgtcaccgacggcgagacggccgaggccgcccgcctgcgcatccagcag
gccgccgccggcgcgctgcatgtcaccgacgtggccagcaaggaacgcaagcgccgcccg
gcgccgccgttcaccacctccaccctgcagcaggaagcctcgcgcaagctcggcttcacc
acccgcaagaccatgcaggtggcgcagaagctgtacgagggcgtgaccctgggcgaggag
ggcacggtcggcctgatcagctacatgcgtaccgactcggtgagcctgtcgcaggaggcg
ctggccgagatccgcgacgtgatcgcgcgcgactacggcaccgcctcggtgccggacaag
cccaacgtctaccagaccaagtccaagaacgcgcaggaagcacacgaggcggtccgcccg
acctcggcgctgcgcacgccggcgcaggtctcgcgcttcctcaccgacgacgagcgcaag
ctctacgacctggtgtggaaacgcgcggtcgccagccagatggtgccggccacgctcaac
accgtgtcggtcgacctggccgcgggcagcgagcacgcgttccgcgccagcggtaccacg
atcgtgttctccggcttcctggccgtgtacgaggaaggcaaggacagcaaggccgccgaa
gacgaggacgagggccgcaagctgccgctgctcaagcctggcgagcgcgtgccgctggac
cgcatccacgccgaccagcacttcacccagccgccgccgcgcttcaccgaggcggcgctg
gtcaaggcgctggaggaatacggcatcggccgcccgtcgacctacgcctcgatcatccag
accctgctgttccgcaagtacgcggagatggaaggccgcgcgttcaagccgaccgacgtg
ggccgcgcggtgagcaagttcctgtccggccacttcgcccgctacgtggactacgacttc
accgccaagctcgaggacgagctggacgcggtctcccgcggcgaggaggagtgggtgccg
ctgatggagaagttctggggcccgttcaaggaactggtcgaggacaagaaggaatcgctg
gaccgtaccgacgccggcagctcgcgctcgctgggcaccgatcccaagagcggcaaggag
gtcagcgcgcgcatcggccgcttcggcccgatggtgcagatcggcaccgtggaggacgag
gaaaagccgaagttcgcctcgctgcagccgggccagagcatctattcgatcagcctggaa
gacgcgctgaagctgttcgacatgccgcgcgtgctcggcgaaagcaacggcgagcaggtc
agcgtcgggatcggccgctttggcccgttcgccaagcgcggcggcacctatgcctcgctg
aagaaggaggacgacccgttcaagatcgacctggcccgcgccgtgttcctggtcgaggag
aaggaggagatcgcgcgcaaccgggtgatcaaggagttccccggcagcgacatccaggtg
ctcaacggccgcttcggcccgtacatcagcgacggcaagctcaacggcaagatccccaag
gaccgcgagccggcctcgctgaccctggccgaggtgcagcagctgctggccgacaccggc
aagccggcccgccgcggcttcggcgccaagaccgcgcagaagggagccaagacggccgcc
aggaaggccgcggccaaggaaccggcgccggcgaaaaccccgcaaaagggagccaaggcg
ccagccaggaaggccccggccaagaaggcggcagcgaagaagacgccgacgaagaaggcg
gccggaaagaccgccgccaagaaggcgccggcgaagaaggtcgcgcgcgccgccgcggac
gacgccccgccgttctga
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