Pseudoxanthomonas suwonensis J1: WQ53_08065
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Entry
WQ53_08065 CDS
T04241
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
psuw
Pseudoxanthomonas suwonensis J1
Brite
KEGG Orthology (KO) [BR:
psuw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psuw03032
]
WQ53_08065 (gyrB)
03400 DNA repair and recombination proteins [BR:
psuw03400
]
WQ53_08065 (gyrB)
Enzymes [BR:
psuw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
WQ53_08065 (gyrB)
DNA replication proteins [BR:
psuw03032
]
Prokaryotic type
DNA Topoisomerases
WQ53_08065 (gyrB)
DNA repair and recombination proteins [BR:
psuw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
WQ53_08065 (gyrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AKC86715
UniProt:
A0A0E3UN83
LinkDB
All DBs
Position
complement(1920570..1923029)
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AA seq
819 aa
AA seq
DB search
MSEHIPSSPPGNDSYDSSKITVLRGLEAVRKRPGMYIGDVHDGTGLHHMVFEVVDNSVDE
ALAGHADDIIVRILEDGSVAVSDNGRGIPVDTHKEEGRSAAEVILTVLHAGGKFDDNSYK
VSGGLHGVGVSVVNALSSHLWLDIWRDGYHWQQEYSLGEPLYPLKQLEASTRRGTMLRFL
PAAEIFTDTEFHYDILARRLRELSFLNSGVKITLIDERGGTPDGSVRQDTFQYEGGIRSF
VEHLAQLKTPLHSNVISVSGEQNGIVVDVALQWTDAYQETMFCFTNNIPQKDGGTHLAGF
RAALTRTLSNYIEQNGLAKQAKINLSGDDMREGMIAVLSVKVPDPSFSSQTKEKLVSSEV
KPAVENTFGARLEEFLQEHPNEARAIAEKVVDAARAREAARKARELTRRKGALDIAGLPG
KLADCQEKDPALSELFIVEGDSAGGSAKQGRNRKNQAVLPLRGKILNVERARFDRMLGSA
EVGTLITALGTGIGKDEYNPDKLRYHRIIIMTDADVDGSHIRTLLLTFFYRQMPELIERG
HIYIGLPPLYKIKQGKTELYLKDDAALDTYLASNAVENAALIPAEGEPPVSGEGLEKLLL
AYAGAREAIARNSHRFDPLLLEALIDFTPLDAEHLAKNTDERHELDALEARLNRGKLGSP
RFALKLLPATESRPAALQITRRHMGEELLQVLPLSIFEHGELRPLRDAAAQLHGLVRDGA
QVMRGGRSQAVASFAQAQAWLLEEAKKGRQIQRFKGLGEMNPEQLWETTVNPDSRRLLRV
RIEDAVAADQIFSTLMGDVVEPRREFIETNALKVANLDV
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagcacatcccgagttccccccccggcaacgattcctacgactccagcaagatc
accgtcctgcgcggcctggaagcggtccgcaagcgcccgggcatgtacatcggcgacgtg
cacgacggcaccggcctgcaccacatggtgttcgaggtggtcgacaactcggtcgacgaa
gccctggccgggcatgccgacgacatcatcgtgcgcatcctcgaggacggctcggtcgcg
gtgtccgacaacggccgcggcatcccggtcgacacgcacaaggaggagggccgttcggcg
gccgaggtgatcctcaccgtgctgcacgccggcggcaagttcgatgacaacagctacaag
gtctccggcggcctgcacggcgtgggcgtgtcggtggtcaacgcgctgtcctcgcacctg
tggctggacatctggcgcgacggttaccactggcagcaggaatactcgctgggcgagccg
ctgtatccgctcaagcagctggaggcgtcgaccaggcgcggcaccatgctgcgcttcctg
ccggccgccgagatcttcaccgacaccgagttccactacgacatcctggcccgccgcctg
cgcgagctgtcgttcctgaactccggggtcaagatcaccctgatcgacgagcgcggcggc
acgcccgatggaagcgtgcgccaggacaccttccagtacgaaggcggcatccgcagcttc
gtcgagcacctggcccaactgaagacgccgctgcactcgaacgtgatctcggtcagcggg
gagcagaacgggatcgtggtggacgtggccctgcagtggaccgacgcctaccaggaaacg
atgttctgcttcaccaacaacatcccgcagaaggacggcggcacccacctggccggtttc
cgggccgcgctgacccgcacgctcagcaactacatcgagcagaacgggctggccaagcag
gccaagatcaatctctccggcgacgacatgcgcgaaggcatgatcgcggtgctgtcggtg
aaggtgccggacccgagcttctccagccagaccaaggagaagctggtcagttcggaggtg
aagccggccgttgagaacacgttcggtgcacgtttggaggagttcctgcaggaacacccg
aacgaggcgcgcgccatcgcggagaaggtggtcgatgccgcccgcgcccgcgaggccgcg
cgcaaggcgcgcgagctgacccgccgcaagggcgcgctcgacatcgccggcctgcccggc
aagctggccgactgccaggagaaggacccggcgctgtcggaactgttcatcgtcgagggc
gactcggccggcggctcggccaagcagggccgcaaccgcaagaaccaggcggtgctgccg
ctgcgcggcaagatcctcaacgtcgagcgcgcgcgcttcgaccgcatgctcggctcggcc
gaggtcggcaccctgatcaccgcgctgggcaccggcatcggcaaggacgagtacaacccg
gacaagctgcgctaccaccgcatcatcatcatgaccgacgcggacgtggacggctcgcac
atccgcacgctgttgctcacgttcttctaccggcagatgccggagctgatcgagcgcggc
cacatctacatcggcctgccgccgctgtacaagatcaagcagggcaagacagagctgtac
ctgaaggacgatgcggcactggacacgtacctggccagcaacgcggtggagaacgccgcg
ctgatcccggccgagggcgaaccgccggtcagtggcgagggcctggagaagctgctgctg
gcctacgccggcgcgcgcgaggcgatcgcccgcaacagccaccgcttcgatccgctgctg
ctggaagcgctgatcgacttcacgccgctcgacgccgagcacctggcgaagaacaccgac
gaacgccacgagctcgacgcgctggaagcgcgcctcaaccgcggcaagctcggcagcccg
cgcttcgcgctgaagctgctgccggccaccgagtcgcgcccggccgcgctgcagatcacc
cgccggcacatgggcgaggaactgctgcaggtgctgccgctgtcgatcttcgagcacggc
gaactgcgtccgctgcgcgatgcggccgcgcagctgcacggactggtgcgcgacggcgcg
caggtcatgcgcggcggccgttcgcaggcggtggccagcttcgcccaggcccaggcctgg
ctgctggaggaagcgaagaagggccgccagatccagcgcttcaagggcctgggcgagatg
aaccccgagcagctgtgggagaccacggtcaatccggattcccgccggttgctgcgcgtg
cggatcgaggacgcggtcgccgccgaccagatcttcagcacgctgatgggcgacgtggtc
gagccgcggcgcgagttcatcgagaccaacgcgctcaaggtcgccaatctcgacgtctga
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