Pseudoxanthomonas suwonensis J1: WQ53_08265
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Entry
WQ53_08265 CDS
T04241
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
psuw
Pseudoxanthomonas suwonensis J1
Pathway
psuw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psuw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
WQ53_08265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psuw03400
]
WQ53_08265
Enzymes [BR:
psuw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
WQ53_08265
DNA repair and recombination proteins [BR:
psuw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
WQ53_08265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AKC88288
UniProt:
A0A0E3Z454
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All DBs
Position
1967426..1970797
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AA seq
1123 aa
AA seq
DB search
MTLAASDFRLYHSNALEVLAGVLARVLREPAPGQPLLAPEIVLIPQVAMRRWLQATLAAE
HGVAANIEFLTPGEFVGQVLAANPPAEAGAPSRDELDAATLHWHLYAALTDPALLATPAL
AAIAAHVGAADPLRAWALAGELAGVFEKYQAWRRDWLLRWEAGADPDDPQAILWRRVASG
RPHRARRIQQYLERFGAHDGPLPVGLPPRLSAFAALNVSPDVLRVIATQARVGSLHFFVP
SPVADYWGDLQRLRRGADVAGAEEHPLLQRWGAAGVDFMRMVGDYEVVHASADIQVHADP
GEGGGALHGSLLRRLQSDLYHRRATPGWPLRPRLDRADPSLQLHACHTRLRELQVLHDQL
RGLFDDPRFDPPLQPREVAVLAPDIDPYLPYLDAVFGRRGQDDAIPYALADASPLANEPL
AEVFLRLLALPVSRFGLHEVLDLLATPALAEANGLDAPALERLQAWLAAAGARWGIDAAH
RGRFDAPEDEAYTWAFALDRLLLGHASGSDAPIVLPGGQVLAPMPDLEGGALDALDTLIR
LLRVLARHARVLGEAMPPAQWRERLLGLLEALLPRPPSNPATQRALDRLRSLVNDFAATA
ARAGYAATVPAEAVRAHFADVLGEADTRAPLLTGGVSIGRMVPMRLLPFRAICVLGMNDG
EFPRRDPAAGLNRLTAELGSDRRRAGDRSTRDDDRFLFLQLMAAAQDVFYVSWLGADPRD
GSEREPSVLVSELIDVARAQHADADAAADALVVRHPLQPFSPAAFGAGDEPRRFSYRHPW
RQAAAQPAVRRVALPPWFEGEVLEPVDGEVELSIDALRRFLLHPANELMKRLGLQLPEVE
EQEEDIEPLAGPASGLERARLQRAVFEALLRGEDEGATHAVLRARGLLPSGASGRRVLAA
QRRELVGYAGAFAQWRGDARPQSLPMPDSLVVNGTRLHGRLEEVYPHGLARLRLGRLNGP
SAIRHGLDWLLASAAGMSQPLVEFHDVDGKLGPHLREPLPVEQARDALGRLLQLRAQGLR
EPLPFAPRSAWEFFNASDYGRGADAAAKQWHGNGGRSFAEGQQEALRLAFRGRDPFADDA
SLLRFADAAMAVFAALQSGMVHGGVDPAALSGLVAAFDAEDGA
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgacccttgccgccagcgacttccgcctctaccactccaatgcgctggaagtgctcgct
ggcgtcctggcccgggtgttgcgcgagccggcgccgggacagccgctgctggccccggag
atcgtgctgatcccgcaggtggcgatgcgccgctggctgcaggcgacgctggcggccgag
cacggggtggcggccaacatcgagttcctcaccccgggggagttcgtcggccaggtgctg
gcggccaacccgcccgcggaggccggtgcgccgtcgcgcgacgaactggatgcggcgacc
ctgcactggcacctgtacgcggcgctgaccgatccggcgctgctggccacgccggcgctg
gcggccatcgccgcgcacgtgggcgccgccgatccgctgcgcgcctgggcgctggccggc
gaactggccggggtgttcgagaagtaccaggcctggcgccgcgactggctgctgcgctgg
gaagccggggccgacccggacgatccgcaggccatcctctggcgccgcgtcgccagcggc
cggccgcaccgcgcccgccgcatccagcagtacctggagcgcttcggcgcccacgacggc
ccgctgccggtgggcctgccgccgcggctgtcggcgttcgccgcgctcaacgtctcgccg
gacgtgctgcgggtgatcgccacccaggcccgggtcggcagcctgcacttcttcgtgccc
tcgccggtggccgactactggggcgacctgcagcgtctgcgccgcggtgcggacgtggcc
ggcgcagaggaacacccgctgctgcagcgctggggcgcggccggcgtggacttcatgcgc
atggtcggcgactacgaggtggtccacgcctcggccgacatccaggtgcacgcggatccg
ggcgaaggcggcggcgcgctgcacggcagcctgctgcgccggctgcagtcggacctctac
caccgccgcgccacccccggctggccgttgcgcccgcggctggaccgcgccgacccgagc
ctgcagctgcacgcctgccacacccgcctgcgcgaactgcaggtgctgcacgaccagctg
cgcggcctgttcgacgacccgcgcttcgatccgccgctgcagccgcgcgaggtcgcggtg
ctggcgccggacatcgacccctacctgccctacctggacgcggtgttcgggcgccgcggc
caggacgatgccatcccctacgcgctggccgatgccagcccgctggccaacgaaccgctg
gccgaggtgttcctgcgcctgctggcgttgccggtgtcgcgcttcggcctgcacgaggtc
ctggacctgctggcgaccccggccctggccgaggccaacggcctggacgcgccggcgctg
gaacggctgcaggcctggctggccgcggctggcgcgcgctggggcattgatgcggcgcac
cgcggccgtttcgatgcgccggaagacgaggcctacacctgggccttcgccctggaccgg
ctgctgctgggccatgcaagcggcagcgatgcgccgatcgtgctgcccggcggccaggtg
ctggcgccgatgccggacctcgagggcggcgcgctggatgcgctggacacgctcatccgc
ctgctgcgggtgctggcccgccatgcccgcgtgctgggcgaggcgatgccgccggcgcag
tggcgcgagcgcctgctcggcctgctggaggcgctgctgccgcggccgccgtccaacccg
gccacgcagcgcgcgctggaccgcctgcgcagcctggtcaatgacttcgccgccaccgcc
gcgcgcgccggctacgcggccacggtgccggccgaggcggtccgcgcgcatttcgccgac
gtgctgggcgaagcggacacgcgcgcgccgctgctcaccggcggcgtcagcatcggccgc
atggtgccgatgcgcctgctgccgttccgggcgatctgcgtgctgggcatgaacgacggc
gagttcccgcgccgcgacccggccgccggcctcaaccggctcaccgccgaactgggcagc
gaccgccgccgcgcgggcgaccgctccacccgcgacgacgaccgcttcctgttcctgcag
ctgatggccgccgcgcaggacgtgttctacgtcagctggctcggcgccgacccgcgcgac
ggcagcgagcgcgagccgtcggtactggtgtcggaactgatcgacgtggccagggcgcag
cacgcggacgccgatgccgcggcggatgcgctggtggtgcgtcatccgctgcagccgttc
tcgccggccgccttcggtgccggcgacgagccgcgccgcttctcctatcgccacccgtgg
cgccaggcggcggcgcagccggcggtgcggcgcgtggcactgccgccgtggttcgaaggc
gaggtgctggaaccagtcgacggcgaggtcgagttgtcgatcgacgctctgcgccgcttc
ctgctgcatccggcgaacgaactgatgaagcgcctgggtctgcagctgcccgaggtcgag
gagcaggaggaggacatcgaaccgctggccgggccggcctccggcctagaacgtgcgcgc
ctgcagcgcgcggtgttcgaggcgctgctgcgcggcgaggacgagggggccacccacgcc
gtactgcgcgcgcgcggcctgttgccttccggtgcgtcgggccgccgcgtgctggccgcg
cagcggcgggagctggtggggtatgccggggcgttcgcgcagtggcgcggcgatgcccgg
ccgcagtcgctgccgatgccggactcgctggtggtgaacggcacccgcctgcatgggcgg
ctggaagaggtatatccgcacggcctcgcgcgcctgcgcctgggcaggttgaacggcccc
tccgcgatccgccatggtctggattggctgctggcctcggcggcgggaatgtcgcagccc
ctggttgaattccacgacgtcgatggcaagctcggcccgcacctgcgcgagccgttgccg
gtggaacaggcgcgggatgccctgggccggctgttgcagctgcgcgcgcagggcctgcgc
gaaccgctgcccttcgcgccgcgcagcgcctgggagttcttcaacgcttccgactacggg
cgtggtgccgacgcggcggccaagcaatggcatggcaatggcggtcgcagcttcgccgaa
ggccagcaggaagcgctccggcttgcgttccgcggccgcgaccccttcgccgacgatgct
tcgctgctgcgcttcgccgatgcggcgatggccgtgttcgccgcgctgcagtcgggcatg
gtccatggaggcgtcgatccggccgcgctcagcggcctggtggccgcattcgacgcggag
gacggcgcatga
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