Pseudoxanthomonas suwonensis J1: WQ53_09255
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Entry
WQ53_09255 CDS
T04241
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
psuw
Pseudoxanthomonas suwonensis J1
Pathway
psuw03420
Nucleotide excision repair
psuw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psuw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
WQ53_09255 (uvrD)
03430 Mismatch repair
WQ53_09255 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psuw03400
]
WQ53_09255 (uvrD)
Enzymes [BR:
psuw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
WQ53_09255 (uvrD)
DNA repair and recombination proteins [BR:
psuw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
WQ53_09255 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
WQ53_09255 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_12
Viral_helicase1
WDR54
Motif
Other DBs
NCBI-ProteinID:
AKC86914
UniProt:
A0A0E3Z174
LinkDB
All DBs
Position
2220486..2222663
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AA seq
725 aa
AA seq
DB search
MDVSHLLDDLNAAQREAVSAPPGHYLVLAGAGSGKTRVLTHRIAWLNEVLGVPAHGILAV
TFTNKAAGEMRARADAQLRHGARGMWIGTFHGIAHRLLRLHWNEARLPEAFQVLDSDDQL
RLVKRVAQQLELDDGRFPPRQIAWWINAQKDEGRRPQHIQPGDDPWTDALRRAYALYQER
CDRAGLVDFAELLLRAHELLRDTPALLAHYRTRFRDLLVDEFQDTNAIQYAFVRVLAGDT
GRVFVVGDDDQAIYGWRGAKVENVQQFLRDFPGAKTIRLEQNYRSSANILNAANAVIAHN
PDRIGKQLWTDSGEGEPVDVYAAYNEMDEARFVVERIRQWMRDGGSWREAAVLYRSNAQS
RALEEVLLAEQVPYRVYGGMRFFERAEIKDTLAYLRLVASRADDAAFERTVNTPTRGIGD
RTLDEVRRRARESSISLWQAATALVSQNALAARARNAVAGFLNLVESLDAETTDLALKDR
VDHVLARSGLREHWASEARGQLDAESRLENLDELVSVASRFSRAELDDDQESMSELVAFL
SYAALEAGEGQAQADEDGVQLMTLHSAKGLEFPLVFLVGVEEGVFPSSKSLEESGRLEEE
RRLAYVGITRARHKLVLTYAESRRIHGMDMYGMPSRFLREIPGHLLNEVRPRVQVARPMA
AAPRMAHPVLETPSLKLGQGVVHASFGRGIVTDYEGSGAHARVQVNFDDAGSKWLVLAFA
KLQPL
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggatgtctcccacctgctcgacgacctcaacgccgcccagcgcgaggccgtgtccgcc
ccgcccggtcattacctggtgctggccggcgccggctccggcaagacccgggtcctgacc
caccgcatcgcctggctgaacgaggtcctgggcgtgccggcgcatgggatcctggcggtc
accttcaccaacaaggccgccggcgagatgcgcgcgcgcgccgatgcgcagctgcgccac
ggcgcgcgcgggatgtggatcggcaccttccacggcatcgcccaccgcctgctgcgtctg
cactggaacgaggcgcgcctgcccgaggcgttccaggtgctggacagcgacgaccagctg
cggctggtcaagcgcgtggcccagcagctggagctggacgacggccgcttcccgccgcgc
cagatcgcctggtggatcaatgcgcagaaggacgaaggccggcgcccgcagcacatccag
cccggcgacgacccgtggaccgacgcgctgcgccgcgcctacgcgctgtaccaggagcgc
tgcgaccgcgccggcctggtcgacttcgccgaactgctgctgcgcgcgcacgagttgctg
cgcgacaccccggcgctgctggcccactaccgcacccgcttccgcgacctgctggtcgac
gagttccaggacaccaacgcgatccagtacgccttcgtccgggtgctggccggcgatacg
ggccgggtgttcgtggtcggcgacgacgaccaggcgatctacggctggcgcggggccaag
gtcgagaacgtgcagcagttcctgcgcgatttcccgggcgcgaagaccatccgcctggag
cagaactaccgctccagcgccaacatcctcaacgccgccaacgcggtgatcgcgcacaat
cccgaccgcatcggcaagcagctgtggaccgacagtggcgagggcgagccggtggacgtg
tacgcggcctacaacgagatggacgaggcccgcttcgtggtcgagcgcatccgccagtgg
atgcgcgacggcggcagctggcgcgaggcggcggtgctctaccgcagcaacgcgcaatcg
cgcgcgctggaggaagtgctgctggccgagcaggtgccgtaccgggtctatggcggcatg
cgcttcttcgagcgcgccgagatcaaggacaccctggcctacctgcgcctggtcgccagc
cgtgccgacgacgcggccttcgagcgcacggtgaacacgccgacgcgcgggataggcgac
cgcaccctcgacgaagtacgccggcgcgcacgcgaatcctcgatctcgctgtggcaggcc
gccaccgcgctggtgtcgcagaacgcgctggcggcgcgcgcgcgcaacgcggtggccggc
ttcctcaacctggtcgaatcgctggacgcggaaaccaccgacctggcgctgaaggaccgg
gtcgaccacgtgctggcccgatcgggcctgcgcgagcactgggccagcgaggcgcgcggc
cagctcgacgccgagtcgcggctggagaacctggacgaactggtctcggtggcctcgcgc
ttttcccgtgctgaactcgacgacgaccaggagagcatgagcgagctggtcgcgttcctg
tcctacgcggcgctggaggccggcgagggccaggcccaggccgacgaggacggggtgcag
ctgatgaccctgcactcggccaagggcctggagttcccgctggtgttcctggtcggggtg
gaggagggcgtgttcccgagcagcaagtcgttggaggagagcgggcggctggaggaggag
cggcggctggcctacgtcggcatcacccgtgctcggcacaagctggtgctgacctacgcc
gagagccggcgcatccacggcatggacatgtacggcatgccctcgcgcttcctgcgcgag
atccccggccacctgctcaacgaggtgcgaccgcgggtgcaggtggcccggccgatggcc
gcggcgccgcggatggcccacccggtgctggagacgccgtcgctgaagctgggccagggc
gtggtgcacgccagcttcggccgcggcatcgtcaccgactatgagggcagcggcgcgcac
gcgcgggtgcaggtcaacttcgacgacgccggcagcaagtggctggtgctggccttcgcc
aagctgcagccgctgtag
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