KEGG   Pseudoxanthomonas suwonensis J1: WQ53_09450
Entry
WQ53_09450        CDS       T04241                                 
Name
(GenBank) ATP-dependent RNA helicase RhlB
  KO
K03732  ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
Organism
psuw  Pseudoxanthomonas suwonensis J1
Pathway
psuw03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:psuw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    WQ53_09450
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psuw03019]
    WQ53_09450
Enzymes [BR:psuw01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     WQ53_09450
Messenger RNA biogenesis [BR:psuw03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     WQ53_09450
SSDB
Motif
Pfam: DEAD RhlB Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: AKC86943
UniProt: A0A0E3Z2C3
LinkDB
Position
2273787..2275535
AA seq 582 aa
MSDKPLTDVAFSSFDLHPALLAGLESAGFTRCTPIQALTLPVALPGRDVAGQAQTGTGKT
LAFLVTVMNRLLTRPALAERKPEDPRALILAPTRELAIQIHKDAVKFGNELGLRFALVYG
GVDYDKQRELLQKGVDVIIATPGRLIDYVKQHKVVSLHACEICVLDEADRMFDLGFIKDI
RFLLRRMPIRTERQTLLFSATLSHRVLELAYEHMNEPEKLVVETETVTAARVRQKLYYPA
DEEKLPLLIGLLSRSEGARTMVFVNTKAFVERVARSLERAGYRVGVLSGDVPQKKRETLL
KKFQAGQLEILVATDVAARGLHIDGVSHVYNYDLPFDAEDYVHRIGRTARLGAEGDAISF
ACERYAMGLPDIEAYIEQRIPSEPVTAELLTALPRKPRERPEAGEGEEDESIGEIFREAR
EQRAADEERRGGGRSRGGKPGHGGGERRDGERRPRRKPAAAVAGGAAVAAAGAGAAVAVA
SGAGNDDEQPTGEARQPRPAKGNGHAQPDAAKAEGERAPRKRRRRRHGKPVEGAAAAADP
NATPPSQVPALHQAPVPAPAAAGKDSFLSRIGRKLRSLVPGG
NT seq 1749 nt   +upstreamnt  +downstreamnt
atgagcgacaaaccgctgaccgatgtagctttttcctcgttcgacctgcacccggcgctg
ctcgccggactcgaatccgcaggcttcacccgctgcaccccgatccaggcgctgaccctg
ccggtcgcattgcccggccgcgacgtcgccggccaggcccagaccggcaccggcaagacc
ctggcgttcctggtcacggtgatgaaccgcctgctgacccgcccggcgctggccgagcgc
aagcccgaggacccgcgcgcgctgatcctggcgccgacccgcgagctggcgatccagatc
cacaaggacgcggtcaagttcggcaacgagctgggcctgcgcttcgccctggtctacggc
ggcgtggactacgacaagcagcgcgagctgctgcagaagggcgtggacgtgatcatcgcc
accccgggccggctgatcgactacgtcaagcagcacaaggtggtctcgctgcacgcctgc
gagatctgcgtgctggacgaggccgaccgcatgttcgacctgggcttcatcaaggacatc
cgtttcctgctgcggcgcatgccgatccgcaccgagcgccagaccctgctgttctcggcc
accctcagccaccgcgtgctggagctggcctacgagcacatgaacgagccggagaagctg
gtggtggagaccgagacggtcaccgccgcgcgcgtgcgccagaagctgtactacccggcc
gacgaggagaagctgccgctgctgatcggcctgctctcgcgcagcgagggcgcgcggacc
atggtgttcgtcaacaccaaggccttcgtcgagcgggtggcgcgctcgctggagcgggcc
ggctaccgggtcggcgtgctctccggcgacgtgccgcagaagaagcgcgagaccctgctg
aagaagttccaggccggccagctcgagatcctggtggccaccgacgtggccgcgcgcggc
ctgcacatcgacggcgtctcccacgtctacaactacgacctgccgttcgacgcggaggac
tacgtccaccgaatcggtcgcaccgcccgcctgggcgccgagggcgacgcgatcagcttc
gcctgcgagcgctacgcgatgggcctgccggacatcgaggcctacatcgagcagcggatc
ccgtccgagccggtcaccgccgaattgctgaccgcgctgccgcgcaagccgcgcgagcga
cccgaggcgggcgagggcgaggaggacgagagcatcggcgagatcttccgcgaggcgcgc
gagcagcgcgccgccgacgaggagcgccgcggcggtggccgttcgcgcggcggcaagccc
gggcacggtggtggcgagcgtcgcgacggcgagcgccgtccgcggcgcaagccggccgcg
gcggtggccggcggagcagcggtggccgcggcgggtgccggcgcggcggtcgcggtggcc
agcggtgctggcaacgacgatgaacagccaaccggcgaggcccgccagccgcggccggcg
aagggcaacggccacgcgcagccggacgccgccaaggcggaaggcgagcgggcgccgcgc
aagcgccgccgccgccgccacggcaagccggtcgaaggtgctgcggcggccgcggacccc
aacgccacgccgccgtcgcaggtgcctgccctgcaccaggcgcccgtgccggcgccggcc
gccgccgggaaggattcgttcctgagccgcatcggccgcaagctgcgctcgctggtgccg
ggcggctga

DBGET integrated database retrieval system