Pseudoxanthomonas suwonensis J1: WQ53_09450
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Entry
WQ53_09450 CDS
T04241
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
psuw
Pseudoxanthomonas suwonensis J1
Pathway
psuw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psuw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WQ53_09450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psuw03019
]
WQ53_09450
Enzymes [BR:
psuw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
WQ53_09450
Messenger RNA biogenesis [BR:
psuw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
WQ53_09450
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
RhlB
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AKC86943
UniProt:
A0A0E3Z2C3
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All DBs
Position
2273787..2275535
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AA seq
582 aa
AA seq
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MSDKPLTDVAFSSFDLHPALLAGLESAGFTRCTPIQALTLPVALPGRDVAGQAQTGTGKT
LAFLVTVMNRLLTRPALAERKPEDPRALILAPTRELAIQIHKDAVKFGNELGLRFALVYG
GVDYDKQRELLQKGVDVIIATPGRLIDYVKQHKVVSLHACEICVLDEADRMFDLGFIKDI
RFLLRRMPIRTERQTLLFSATLSHRVLELAYEHMNEPEKLVVETETVTAARVRQKLYYPA
DEEKLPLLIGLLSRSEGARTMVFVNTKAFVERVARSLERAGYRVGVLSGDVPQKKRETLL
KKFQAGQLEILVATDVAARGLHIDGVSHVYNYDLPFDAEDYVHRIGRTARLGAEGDAISF
ACERYAMGLPDIEAYIEQRIPSEPVTAELLTALPRKPRERPEAGEGEEDESIGEIFREAR
EQRAADEERRGGGRSRGGKPGHGGGERRDGERRPRRKPAAAVAGGAAVAAAGAGAAVAVA
SGAGNDDEQPTGEARQPRPAKGNGHAQPDAAKAEGERAPRKRRRRRHGKPVEGAAAAADP
NATPPSQVPALHQAPVPAPAAAGKDSFLSRIGRKLRSLVPGG
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaaaccgctgaccgatgtagctttttcctcgttcgacctgcacccggcgctg
ctcgccggactcgaatccgcaggcttcacccgctgcaccccgatccaggcgctgaccctg
ccggtcgcattgcccggccgcgacgtcgccggccaggcccagaccggcaccggcaagacc
ctggcgttcctggtcacggtgatgaaccgcctgctgacccgcccggcgctggccgagcgc
aagcccgaggacccgcgcgcgctgatcctggcgccgacccgcgagctggcgatccagatc
cacaaggacgcggtcaagttcggcaacgagctgggcctgcgcttcgccctggtctacggc
ggcgtggactacgacaagcagcgcgagctgctgcagaagggcgtggacgtgatcatcgcc
accccgggccggctgatcgactacgtcaagcagcacaaggtggtctcgctgcacgcctgc
gagatctgcgtgctggacgaggccgaccgcatgttcgacctgggcttcatcaaggacatc
cgtttcctgctgcggcgcatgccgatccgcaccgagcgccagaccctgctgttctcggcc
accctcagccaccgcgtgctggagctggcctacgagcacatgaacgagccggagaagctg
gtggtggagaccgagacggtcaccgccgcgcgcgtgcgccagaagctgtactacccggcc
gacgaggagaagctgccgctgctgatcggcctgctctcgcgcagcgagggcgcgcggacc
atggtgttcgtcaacaccaaggccttcgtcgagcgggtggcgcgctcgctggagcgggcc
ggctaccgggtcggcgtgctctccggcgacgtgccgcagaagaagcgcgagaccctgctg
aagaagttccaggccggccagctcgagatcctggtggccaccgacgtggccgcgcgcggc
ctgcacatcgacggcgtctcccacgtctacaactacgacctgccgttcgacgcggaggac
tacgtccaccgaatcggtcgcaccgcccgcctgggcgccgagggcgacgcgatcagcttc
gcctgcgagcgctacgcgatgggcctgccggacatcgaggcctacatcgagcagcggatc
ccgtccgagccggtcaccgccgaattgctgaccgcgctgccgcgcaagccgcgcgagcga
cccgaggcgggcgagggcgaggaggacgagagcatcggcgagatcttccgcgaggcgcgc
gagcagcgcgccgccgacgaggagcgccgcggcggtggccgttcgcgcggcggcaagccc
gggcacggtggtggcgagcgtcgcgacggcgagcgccgtccgcggcgcaagccggccgcg
gcggtggccggcggagcagcggtggccgcggcgggtgccggcgcggcggtcgcggtggcc
agcggtgctggcaacgacgatgaacagccaaccggcgaggcccgccagccgcggccggcg
aagggcaacggccacgcgcagccggacgccgccaaggcggaaggcgagcgggcgccgcgc
aagcgccgccgccgccgccacggcaagccggtcgaaggtgctgcggcggccgcggacccc
aacgccacgccgccgtcgcaggtgcctgccctgcaccaggcgcccgtgccggcgccggcc
gccgccgggaaggattcgttcctgagccgcatcggccgcaagctgcgctcgctggtgccg
ggcggctga
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