Pseudoxanthomonas suwonensis J1: WQ53_10680
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Entry
WQ53_10680 CDS
T04241
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
psuw
Pseudoxanthomonas suwonensis J1
Pathway
psuw03420
Nucleotide excision repair
psuw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psuw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
WQ53_10680
03430 Mismatch repair
WQ53_10680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psuw03400
]
WQ53_10680
Enzymes [BR:
psuw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
WQ53_10680
DNA repair and recombination proteins [BR:
psuw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
WQ53_10680
MMR (mismatch excision repair)
Other MMR factors
WQ53_10680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Peptidase_M78
AAA_11
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
AKC87141
UniProt:
A0A0E3UNG1
LinkDB
All DBs
Position
2555595..2558789
Genome browser
AA seq
1064 aa
AA seq
DB search
MGALQRTSQRITLSNALDPEAKVFVQAHEFGHWVIESPADPVLVSFDVDAEGPEQATPLG
TGRVEGYSALEMRERYANVFAREFLLPVDLARHLFVEQQWPASKIASELGIASGLVYQQL
QYALLVPDPPPASPDKPLAELDPSQHIAAHHVGTPALVEAGPGTGKTRTLIGRIEHLLKA
GTDPRSILALTFSNKAAREIKERIARMIPTANELWAGTFHAFGLELLRKHAAQAGLPEPV
RVVDPADALERLEAVLPSLELNYYLRLNDPLAQIQPVLGAISRAKDELCTPAQYAALAAQ
MAQGAQTDAEREAAERADEVARVYARYESMLEEAGAVDFGDLIWRAIRLLEDHPEVLAAV
RDQFAHVLVDEYQDVNRASSRLLKLIAGEGERLWVVGDVRQAIYRFRGASPGNMRLFTTE
YPGAKVLPLERNYRSGQRIIDTYTTFARSLDDPVWRAVTQLKADRGDGHRPQLLVAPDLD
SEVSAIAQAIEAHRQQGVGYRDQAIIVRTHTHAERVAVRLQALGVPSMYLGDIFERAEVR
DLLALISFVAEPSRGALLRLAATGAYGMPLEDVRTFLQHAHAAQHMPLAALSDPAVVAAC
SPAGRTALERLRDDLASVSFESTVPQVLHHVLFERRALIDELLEGERSADQQRRLAVFQL
LQFAAEHFDPRKGNSKKNLLRWIRRLEQFGEERALRELPAAAASIDAVRLMTVHASKGLE
FPVVYLPYLATTHFPQSGRYVPCPPPTGMLRTEDVSDRFEEESLFYVALSRARDYVHLSR
SQRLGARNASESKFLPSIVGQVTRTDAPQCAPLPIADELPARPELKLEPSIHEARELDQY
ERCPRKYAYSRSLGLHASGDDDGYARFHRSVYAVLSWVLQQRQTREVPLEEYWPQLEQVW
ATQGPGDHPFSPVYKDFAVRLLTKAQEHLRAPEATSQPVEMDVGGVRVRVELDQTEPGNG
GLVRRYKTGRRPKKVKVELPETLRLLAGQQLYGKDARLQMHYLTSGDTVDLEITGKQLDA
TVAEVRTIANAIAAGEFPPNIGDQCPRCPFFFLCPAIPPVAVAS
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcgttgcaacgcaccagtcagcgcatcaccctttccaacgcgctggatccggaa
gcgaaggtcttcgtccaggcccacgagttcggtcattgggtgatcgaatcgcccgccgat
ccggtgctggtgagcttcgatgtcgacgccgaggggcccgaacaggccacgcccttgggc
acggggcgcgtggaaggctacagcgcgctggagatgcgcgagcgctatgccaacgtgttc
gctcgcgaattcttattgccggtggacctggcccggcacctgttcgtcgagcagcagtgg
ccggcctcgaagatcgccagcgagctgggaatcgcgtcgggcctggtctaccaacagctg
cagtacgcactgctggtgcccgatccgccgcctgcgtcaccggacaaaccgctcgcggag
ctggatccgtcgcagcacatcgccgcccaccacgtgggcacgccggcgctggtggaagcc
ggcccgggcacgggcaagacgcgcacgctgattggacgcatcgagcacctgctcaaggcg
ggcaccgatccgcggtcaatcctagcgttgaccttctccaacaaggcggcgcgcgagatc
aaagagcgcatcgcacgcatgatcccgaccgcgaacgagctgtgggccgggaccttccac
gccttcggcctggaattgctgcgcaagcatgccgcccaagccggactgcccgagccggtg
cgcgtggtggacccagccgatgcgctcgagcgcctggaagcggtgctgccgagcctggag
ttgaactactacctgcgattgaatgatccgctcgcccagatccagccggtgctgggcgcg
atctcgcgcgccaaggacgagctttgcacgccggcgcagtacgccgcgttggcggcgcaa
atggcccaaggcgcgcaaaccgatgccgaacgcgaggccgctgagcgggccgacgaagtg
gctcgggtctatgcccgctacgagtcgatgctcgaagaagcgggggcggtagattttggc
gacctgatctggcgtgccatccgcctgctggaagatcaccccgaggtgctggccgcggtc
cgcgaccagttcgcccacgtgctggtggacgagtatcaagacgtcaaccgcgccagctcg
cgcctgctcaagctgatcgcgggcgagggagagcgcttgtgggtggtcggcgacgtgcgc
caggcgatctaccggttccgcggcgcatccccaggcaatatgcgcctgtttacgaccgaa
taccccggcgccaaggtgttgccgctggagcgcaactaccgctccgggcaacgtatcatc
gatacctacacgactttcgcccgcagcctggacgatccggtctggcgcgctgtcacgcag
ctcaaagccgatcgcggcgacgggcaccgccctcagctcctggtcgcaccggacctggat
tcggaagtcagcgccatcgcgcaggcgatcgaggcccatcgccaacaaggcgtgggctac
cgcgaccaggccatcatcgtgcgaacgcatacccacgccgagcgcgtcgccgtgcgtttg
caggcgttgggcgtgccgtcgatgtatctgggcgacatcttcgagcgcgcggaagtgcgc
gatttgctggcgttgatttcgttcgtcgccgaacccagccgcggcgccttgttgcggctg
gcggccaccggcgcctacggcatgcccctagaagacgtgcgcacgttcttgcagcacgcg
cacgcggcccagcacatgccactggcggcgttgtccgaccccgcggtcgtcgccgcgtgc
tcgccggccgggcgcacggccttggagcgcttgcgcgatgacctggccagcgtgtcattc
gaatcgaccgtcccgcaggtgctccatcacgtactgttcgagcgtcgcgccctgatcgat
gaactgctagaaggcgagcgtagcgctgaccagcaacgccgcttggctgtcttccaactg
ctgcagttcgccgctgagcatttcgacccgcgcaagggcaactccaagaagaacctgctg
cgctggatccgccggctggagcaattcggtgaggagcgagcgctccgcgagttgccagcg
gccgccgcctcgatcgatgcggtgcggctgatgacggtccacgccagcaagggcctggaa
tttccggtggtgtacctgccgtacctggccaccacccactttccgcaatccggccgctac
gtcccgtgcccgccgccgaccggcatgttgcgcaccgaggatgtcagcgaccggttcgag
gaagaaagcctgttttacgtggcgctctcgcgcgcacgcgactatgtgcatctgtcgcga
tcccagcggctgggcgcccgcaatgcctccgaatctaagttcctgccgtccatcgtgggg
caggtcacgcgcaccgacgccccccagtgcgcgccgttgccgatcgctgacgagttgccc
gctcgcccggagctcaagctcgagccgtcgatccacgaggcacgcgagttggatcagtac
gaacggtgcccacgcaagtacgcctactcccggagcctgggcctgcacgccagcggggac
gatgacggatacgcgcgttttcaccgctcggtctacgcggtgttgtcgtgggtgctgcag
cagcggcaaacgcgcgaagttccgctggaggagtactggccccagcttgagcaggtgtgg
gcgactcaaggaccgggggatcatccgttttcgccggtctacaaggacttcgccgtgcgc
ttgctcactaaggcgcaagaacatctgcgcgcgcccgaggcgacctcccagccagtggaa
atggacgtgggcggcgtgcgcgtgcgcgtggagctcgaccagaccgagccaggcaacggc
ggcctggtgcgccgctacaagaccggtcgccgccccaagaaggtgaaggtggaactgcct
gagaccttgcgactgctggccggccaacagctctacggaaaagatgcgcgtttgcagatg
cattatctgacctccggcgacaccgtcgatctggagatcaccggtaagcagctcgatgcc
accgtggccgaggtgcgcaccattgccaatgccatcgccgccggcgagttcccgccgaac
atcggcgaccaatgcccgcgttgcccgtttttcttcttgtgtccggcgatcccgccggtc
gcggtggcttcctga
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