Pseudoxanthomonas suwonensis J1: WQ53_12385
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Entry
WQ53_12385 CDS
T04241
Name
(GenBank) RNA-binding protein Hfq
KO
K03666
host factor-I protein
Organism
psuw
Pseudoxanthomonas suwonensis J1
Pathway
psuw02024
Quorum sensing
psuw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psuw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WQ53_12385
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
WQ53_12385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psuw03019
]
WQ53_12385
03036 Chromosome and associated proteins [BR:
psuw03036
]
WQ53_12385
Messenger RNA biogenesis [BR:
psuw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
WQ53_12385
Chromosome and associated proteins [BR:
psuw03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
WQ53_12385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
AKC87430
UniProt:
A0A0E3UP14
LinkDB
All DBs
Position
2987306..2987581
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AA seq
91 aa
AA seq
DB search
MSKGQSLQDPFLNALRRERVPVSVYLVNGIKLQGTIESFDQFVVLLRSTVSQMVYKHAIS
TVVPSRNVRVGPGGGYVQQPGESGEGGDEAE
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagggacaatcgctgcaggatcctttcctgaacgcactgcgccgcgaacgcgtg
ccggtgtcggtctacctggtgaacggcatcaagttgcagggtacgatcgaatccttcgac
cagttcgtggtgctgctgcgcagcaccgtcagccagatggtctacaagcacgccatttcc
accgtcgtgccgtcgcgcaatgtccgggtcggcccgggcggcggctacgtgcagcagccg
ggcgaatccggggaaggcggcgacgaggccgagtga
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