Pseudoxanthomonas suwonensis J1: WQ53_14600
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Entry
WQ53_14600 CDS
T04241
Name
(GenBank) ssDNA exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
psuw
Pseudoxanthomonas suwonensis J1
Pathway
psuw03410
Base excision repair
psuw03430
Mismatch repair
psuw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psuw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
WQ53_14600
03430 Mismatch repair
WQ53_14600
03440 Homologous recombination
WQ53_14600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psuw03400
]
WQ53_14600
DNA repair and recombination proteins [BR:
psuw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
WQ53_14600
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
WQ53_14600
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
WQ53_14600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
AKC87805
UniProt:
A0A0E3UPG2
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Position
3514818..3516617
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AA seq
599 aa
AA seq
DB search
MAPPRIVRRPQVGAPLDGPAAWPDAIPPLLRRIYAARGAHSPALARPRLADLLPPDALHG
LDAATTLLAAAIAGDRHIVVVGDFDCDGATACATGVRGLRLLGARRVSHAVPNRMVHGYG
LSPALVDELAALQPDLLLTVDHGIACHAGIEAARARGWQVVVTDHHLPGPRLPAANAIVN
PNLPGDAFPSKALAGVGVVFYLLLALRRRLYSCDRPPIRSGAGSDREDQAAAIHGRTSQE
GQPDLASLLDLVAVGTVADLVPLDANNRALVAAGLRRLRAGRGCAGLRALVEACGRDAAR
LTAADIGFAIAPRLNAAGRLEDMALGIECLLTDDPQRARELAGLLEGINAERRAVQQHMT
DDAEAALARATLAEAGAPLAPCLFDPEWHPGVIGLVASKMKERLHRPVLAFAPAEPGSGV
LRGSARSIPGFHIRDALAAVDTAHPGLIERFGGHAMAAGLTLAKDRLAAFEQAWQAHAAA
VLDDGMLQAELLSDGELLPREFDRFHAEALRDGGPWGQGFPEPLFDGLFEVLDWRVVGER
HLKLTLRHPDRREPLAAIQFGGWRGRAPDPQARLAYRLAPDDYRGGQAIQLLVEHFAPA
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggccccgccgcgcatcgtccgccgcccgcaggtgggcgcgccgttggatgggccggcg
gcctggccggacgcgatcccgccgctgctgcgccggatctacgccgcgcgcggcgcgcat
tccccggcactggcgcggccgcgcctggccgacctgttgccgcccgatgccctgcacggc
ctggacgcggccaccacgctgctggccgcggcgatcgccggcgaccgccacatcgtggtg
gtcggcgatttcgactgcgatggcgccaccgcctgcgccaccggcgtgcgcgggctgcgc
ctgctcggcgcgcgccgggtctcgcacgcggtgcccaatcgcatggtccacggttacggc
ctgtcgccggcgctggtggacgaactggccgcgctgcagcccgacctgctgctcaccgtc
gaccacggcatcgcctgccatgcaggtatcgaggcagcgcgcgcgcgcggctggcaggtc
gtggtcaccgaccaccacctgcccgggccgcggctgccggccgccaacgccatcgtcaac
ccgaacctgcccggcgacgccttcccgagcaaggcgctggccggagtgggcgtggttttc
tacctgttgctggcgctgcggcgaaggctgtactcctgcgatcgtcccccgatcaggtcg
ggggcaggctctgatcgcgaagatcaagcagcggccatccatggccgcacttctcaagaa
gggcagccggatctggcgtcgctgctggacctggtcgcggtgggcacggtcgccgacctg
gtaccgctggacgccaacaaccgcgcgctggtcgccgccggcctgcggcgcctgcgcgcc
ggccgcggctgcgccggcctgcgcgcgctggtcgaggcctgcggccgcgacgcggcgcgg
ctgaccgccgccgacatcggtttcgccatcgccccgcggctgaacgcggccggccggctg
gaggacatggcgctgggcatcgaatgcctgctcaccgacgacccgcagcgcgcgcgcgaa
ctggccggcctgctcgaaggcatcaacgccgaacgccgcgcagtgcagcagcacatgacc
gacgacgccgaggccgcgctggcgcgggcgacgctggccgaggccggcgcgccgctggcg
ccgtgcctgttcgatccggaatggcacccgggcgtgatcggcctggtcgcgtcgaagatg
aaggagcgcctgcaccggccggtgctggcgttcgccccggccgagccgggcagcggcgtg
ctgcgcggctcggcgcgatcgatccccggcttccacatccgcgacgcgctggcggcggtg
gacaccgcgcatccgggcctgatcgagcgtttcggcgggcacgcgatggccgccggcctg
accctggccaaggaccggctggccgccttcgaacaggcctggcaggcgcatgcggccgcg
gtcctggacgacggtatgctgcaggccgagctgctcagcgacggcgaactgctgccgcgc
gagttcgaccgcttccacgccgaggcgctgcgcgacggcgggccttgggggcagggcttc
cccgagccgctgttcgacggcctgttcgaagtgctggactggcgcgtggtcggcgagcgc
cacctgaagctgaccctgcgccatcccgaccgccgcgagccgctggcggcgatccagttc
ggcggctggcgcgggcgggcgcccgatccgcaggcgcgtctggcctaccggctggcgccg
gacgactaccgcggcggccaggcgatccagctgctggtcgagcatttcgcaccggcctga
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