Pseudoalteromonas sp. 13-15: ATS72_000895
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Entry
ATS72_000895 CDS
T11844
Name
(GenBank) ATP-dependent RNA helicase
Organism
psuz Pseudoalteromonas sp. 13-15
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Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
P-loop_SecA
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AUL72261
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Position
1:complement(183707..185509)
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AA seq
600 aa
AA seq
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MSEPVTFESLNLSPAILKAVEELGYKTPSEIQAQCIPLLLERKDVLGLAQTGTGKTAAFA
LPLLNNIDPSVKQPQILVLTPTRELAIQVAEAFEQYAKGTRGVEVLALYGGQSYSIQLSA
LRRGAQIIVATPGRLIDHINRGTIKFDALQALVLDEADEMLRMGFIDDVENIMEKTPREK
QTCLFSATMPKQIQNISSKYMNNPEQVHISARNSTVSSVEQVFWNASVHKNKAIVRFLEA
EQYEGAIVFVRTRNDTVQLAELLEREGFSAAPLNGDMNQQARERTVDRLKSGMLNVVIAT
DVAARGLDVDRLSLVINYDIPQDSEAYVHRIGRTGRAGRTGKAILFVKHNERYLLKNIIR
HTKSEIAQVELPTAKVVEEKRIAALQAKLSIALENKDITFFNEVATNMAEKLDLPLENLA
GALLCLAQQQSPIKVEEVKIQPRERNERNSRNDRGDRGRRNERGGERSERKPRERNSRDA
GPMDTYRIEVGREHGVQVKNIVGAIANEADISSKFIGDIRLHDQHSTVQLPQNMPKDVLD
HFQKVFICKRPMGMTITQDQGPAEPRGERPSGDRKRNDGPRGDKRSGPRKERRPVSFTAK
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaccagtcacgtttgaatctctaaatctttctcctgcaattttgaaggcagtt
gaagagttgggttacaagacaccatctgaaatccaagctcaatgtataccgttattgcta
gaaagaaaggacgtactgggactagcacaaacgggtacaggtaaaaccgcagcatttgca
ctgccgttactaaacaatattgacccgtctgtgaaacagccacagatccttgtactcaca
cctacacgtgagcttgcgatccaagttgctgaggcatttgaacaatatgcaaaaggtact
cgtggtgttgaagtattagcactatacggtggccaaagctacagcattcaattaagcgca
cttcgtcgtggcgctcaaatcattgttgctactccgggtcgattaatcgatcatattaac
cgtggcactatcaagtttgatgctcttcaagcacttgtacttgatgaagccgatgaaatg
ttacgtatgggctttatcgatgatgttgaaaacatcatggaaaaaacaccgcgcgaaaag
caaacatgtcttttctctgcgaccatgcctaagcaaattcaaaacatcagcagcaaatat
atgaataaccctgaacaggttcatatttctgcgcgtaactcgacagtatcgtctgttgag
caagtgttttggaacgcaagcgtacataaaaacaaagcgattgttcgctttttagaagct
gagcaatacgaaggtgctattgttttcgtacgtacacgtaacgataccgttcaacttgct
gaattattagagcgcgaaggtttctctgcagctccgcttaatggtgacatgaaccagcaa
gcacgtgaacgcactgttgaccgcttaaaaagtggcatgctgaacgttgttattgcaaca
gacgtagcagctcgtggtcttgatgtagaccgtttaagcttagttatcaactacgacatt
ccacaagattctgaagcctacgttcaccgtattggtcgtacaggtcgtgcaggtcgtact
ggtaaagcaattttatttgttaagcataacgaacgttacttacttaaaaatatcattcgt
catactaagtctgaaattgcacaggttgaattaccaacagctaaagttgttgaagaaaaa
cgtatcgctgcgttacaagcaaaattaagtattgcgcttgaaaacaaagacattacgttc
tttaacgaagtggctactaacatggctgaaaagcttgaccttcctcttgaaaacttagcg
ggtgctttactgtgtttggcacagcaacagtcgccaattaaagttgaagaagttaagatt
caaccacgtgagcgtaatgaacgcaattcacgcaatgaccgtggtgatcgcggacgtcgt
aacgaacgtggtggtgaacgttctgaacgtaaaccgcgcgagcgtaacagccgtgatgca
ggccctatggatacttaccgtatcgaagtaggtcgtgagcatggtgttcaggttaagaat
attgttggcgcaattgctaatgaagctgatatctcaagcaagtttattggtgacattcgt
ttacacgatcaacacagcactgttcagttaccacaaaacatgcctaaagatgtactggat
catttccaaaaagtgtttatttgtaaacgcccaatgggtatgacaattacacaagatcaa
ggcccagctgaaccacgtggcgaacgcccatctggtgatagaaaacgtaacgatggccca
cgcggtgataagcgtagcggacctcgtaaagaacgtcgcccagttagctttaccgctaag
taa
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