Pseudomonas sp. VLB120: PVLB_00480
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Entry
PVLB_00480 CDS
T02897
Name
(GenBank) choline ABC transporter periplasmic binding protein
KO
K02002
glycine betaine/proline transport system substrate-binding protein
Organism
psv
Pseudomonas sp. VLB120
Pathway
psv02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
psv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PVLB_00480
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psv02000
]
PVLB_00480
Transporters [BR:
psv02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
PVLB_00480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OpuAC
Motif
Other DBs
NCBI-ProteinID:
AGZ32906
UniProt:
A0AAN0QY25
LinkDB
All DBs
Position
complement(106054..106977)
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AA seq
307 aa
AA seq
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MQKFSAAVFALTLSLGTAHAADSDAQCSTVKMADPGWSDIASTNAISRLLLESLGYQVKI
DSLAVPIIYGGLKDGRVDAFLGNWMPAQQGFHDKFIANGDVQRLSRNLEGTEFTLAVPDY
VWQAGVKDFADLQKHAEQFDKKLYGIGSGAPANLSLKEIIDKNQFNLGQWKLVESSEQAM
LAQVDRAVKKQQFITFLGWTPHPMNVKLKMHYLTGGEKWFGSKGDVYTLTRKGYPQACPN
AAKLLGNLKFTLDMENSIMAEVVDKKIGFDEAAKAWVKANPQVLEAWLAGVTTKADGDAL
EAVNARL
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagttctccgccgccgtgttcgcccttaccctgagcctgggcacggcccatgcc
gccgacagcgatgcacaatgcagcaccgtgaaaatggctgaccccggctggagcgatatc
gcttccaccaacgccatcagccgcctgcttctggaaagcctgggctaccaggtgaagatc
gacagcctggcggtaccgatcatctacggtggcctcaaagatggccgggtcgacgcgttc
cttggtaactggatgcctgcacagcagggcttccatgacaaattcatcgccaacggcgat
gtgcagcggctgtcgcgcaacctggagggaaccgagttcaccctggcagtgccggactat
gtctggcaggcaggcgtgaaagactttgccgacctgcagaagcatgccgagcagttcgac
aagaagctgtacgggatcggttccggggcccccgccaacctgtcgctgaaagagatcatc
gacaagaaccagttcaacctcggccagtggaaactggtcgaatccagcgagcaggcaatg
ctggcgcaggtggaccgcgccgtgaagaagcagcagttcatcactttcctcggctggaca
cctcacccgatgaacgtgaaacttaaaatgcattacctgaccggcggggagaagtggttc
ggcagcaaaggcgacgtctacacgttgacgcgcaagggttatccacaagcatgcccaaat
gcggcgaaactgcttggcaacctgaaatttaccttggacatggaaaacagcatcatggcc
gaggttgtggataagaagatcggcttcgatgaagcggccaaagcgtgggtgaaggccaat
ccgcaggtgctggaagcgtggttggcaggcgttaccaccaaggccgatggcgatgccctg
gaggcagtgaacgctaggctctga
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