Pseudomonas sp. VLB120: PVLB_00710
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Entry
PVLB_00710 CDS
T02897
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
psv
Pseudomonas sp. VLB120
Pathway
psv03030
DNA replication
psv03410
Base excision repair
psv03420
Nucleotide excision repair
psv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PVLB_00710
03410 Base excision repair
PVLB_00710
03420 Nucleotide excision repair
PVLB_00710
03440 Homologous recombination
PVLB_00710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psv03032
]
PVLB_00710
03400 DNA repair and recombination proteins [BR:
psv03400
]
PVLB_00710
Enzymes [BR:
psv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PVLB_00710
DNA replication proteins [BR:
psv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PVLB_00710
DNA repair and recombination proteins [BR:
psv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PVLB_00710
NER (nucleotide excision repair)
GGR (global genome repair) factors
PVLB_00710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Obc1_cap
Prok-E2_E
Motif
Other DBs
NCBI-ProteinID:
AGZ32952
UniProt:
A0AAN0QYA0
LinkDB
All DBs
Position
147653..150400
Genome browser
AA seq
915 aa
AA seq
DB search
MSQVPLVLVDGSSYLYRAFHALPPLTTSKGMPTGAVKGVLNMLKSLRKQYPDSLFAVVFD
AKGGTFRDAMFAEYKANRPSMPDDLRVQVEPLHASVKALGYPLLCVEGVEADDVIGTLAR
SSATAGRPVIISTGDKDMAQLVDGHVTLVNTMTGSVLDVAGVREKFGVGPEHIIDFLALM
GDKVDNIPGVPGVGEKTAVGLLTGIGGGLSDLYANLDKVAALPIRGAKTLPAKLEEHRDA
AFLSYELATIKVDVALEIDVDDLVCGEPDREALLALYTEMEFKSWIAEVQRDASQAGEAL
EPVEAPAAKVEPKYETILDQARFDAWLEKLRQAQLFAFDTETTSLDAQQAQLVGLSFAVE
PHEAAYVPLAHDYEGAPTQLDREQVLKALKPLLEDPGKAKVGQNAKYDINILANCELAIQ
MRGVAYDTMLESYVLDSTATRHDMDSLAQKYLDHTTITFEQIAGKGAKQLTFNQIPLEKA
GPYAAEDADITLRLHQALQARLAKTPSVQPVLMDIEMPLVPVLAKIERQGALVDAELLKI
QSGELGVKMAELERRAFELAGEEFNLGSPKQLGAILYDKLGMPVLSKTAKGQPSTAEAVL
DELAEQGYPLPEVLMQYRTLSKLKSTYTDKLPGQINPRTGRIHTSYQQAVAATGRLSSSD
PNLQNIPIRTAEGRRIRQAFIASPGYKLLAADYSQIELRIMAHLAKDEGLLHAFRNNLDV
HRATAAEVFGVALEAVTTDQRRSAKAINFGLIYGMSAFGLAKQIGVDRKQSQDYIDRYFA
RYPGVLAYMERTRAQAAEQGFVETLFGRRLYLPDINAKNPALRKGAERTAINAPMQGTAA
DIIKRAMVNVDNWLTQSNLDARVILQVHDELVLEVKEGLVEQVKDEIRTQMSNAAQLDVP
LLVEVGVGSNWDEAH
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagtgcccctcgtcctggtggacggttcctcctatctctaccgcgcctttcac
gcgctgccgccgctgaccacgtccaagggcatgccaaccggcgcggtcaagggtgtgctg
aacatgctcaagagcctgcgcaagcaatatccagacagcctgttcgccgtggtgttcgac
gccaagggcggtacgttccgcgatgcgatgttcgccgagtacaaggccaaccggccaagc
atgcccgacgatttgcgggtacaggtcgaaccgctgcacgccagtgtgaaagccctgggc
taccccctgttgtgcgtcgaaggcgtcgaagccgacgacgtgatcggcaccctggctcgc
agcagtgccaccgctggccggccggtgatcatctcgaccggtgacaaggacatggcgcag
ttggtcgacgggcacgtcacactggtgaacaccatgaccgggagcgtgctggacgtggcg
ggcgtgcgcgaaaagttcggtgtcgggcccgagcatatcatcgacttccttgccctgatg
ggcgacaaggtcgacaacatccccggcgtgccgggcgtgggcgaaaagacggcggtcggc
ctgctgacagggatcggcggtggtctgagcgacctgtacgctaacctcgacaaggtggcg
gccctgccgatccgtggtgccaagaccctgccagccaagctcgaagagcatcgcgatgcc
gcgtttctgtcgtatgagttggccaccatcaaggtcgacgtggcgctggaaatcgacgtc
gatgacctggtctgcggcgaacccgaccgcgaggcgctgctggcgctgtacaccgaaatg
gagttcaagagctggatcgccgaggtccagcgtgacgccagccaggccggtgaagccctt
gaaccggtcgaggcaccggcggccaaggttgaacctaaatacgaaaccatcctcgaccag
gctcgcttcgatgcctggcttgagaagctgcgccaggcccagctgtttgccttcgacacc
gaaaccaccagcctggatgcacagcaggcacagttggtgggcctgtcgttcgcagtcgag
ccccatgaggcggcctatgtgccgctggcccacgactacgaaggggccccgacgcagctg
gaccgcgagcaagtgttgaaggcgctcaagccgttgctggaggacccaggcaaggccaag
gtcggtcagaacgccaagtacgacatcaatattctcgccaattgcgagctggccattcag
atgcgtggcgtcgcctatgacaccatgctcgaatcctacgtgctggattccactgccacc
cgtcacgacatggacagcctggcgcagaaatacctcgatcacaccaccattaccttcgag
cagattgcgggcaagggtgccaagcagctgaccttcaaccagattcccctggaaaaggcc
ggcccctatgctgccgaggacgccgatatcaccttgcgtctgcaccaggcgctgcaggcg
cgcctggccaagaccccgagcgtgcagccggttctgatggacatcgagatgccgctggtg
ccggtgctggccaagatcgagcgccagggggcattggtcgatgccgaactgctgaagatc
caaagtggcgagctgggtgtgaaaatggccgagctggagcgccgcgccttcgagttggct
ggcgaggagttcaacctgggttcgcccaagcagctgggtgccatcctgtacgacaagctg
ggcatgcccgtgctgagcaagactgccaaagggcagccttccaccgctgaagcggtgctc
gatgaactggccgaacagggttacccgctgcccgaagtactgatgcagtaccgcaccctg
agtaaactcaagagcacctacaccgacaagcttccagggcagatcaacccgcgtactggg
cgcatccacacctcgtaccagcaagccgtggccgcgaccgggcgcctgtcgtccagcgac
ccgaacctgcagaacatcccgatccgcacggccgaaggccgacgcattcgtcaggccttc
attgccagccccggttacaagctgctggcggcggactactcgcagatcgagctgcgcatc
atggctcacctggccaaggacgaaggcctgctgcatgccttccgcaacaacctcgatgtc
caccgtgcgactgccgccgaagtcttcggtgtggcactcgaggcggtcaccacggaccag
cgccgcagcgccaaggccatcaacttcggcttgatctacggtatgagcgcctttggactg
gccaagcagatcggtgtcgatcgcaagcagtcacaggactacattgaccgttatttcgcc
cgctaccccggtgtgctggcctacatggagcgcacgcgtgcccaggcggccgagcaaggc
ttcgtcgagaccctgttcggacgccgcctgtacctgccggacatcaacgccaagaaccca
gccttgcgcaaaggcgccgaacgcacggcgatcaacgcgccgatgcagggcaccgcagcc
gatatcatcaagcgggcgatggtgaatgtggacaactggctcacccagagcaatctggat
gcccgtgtgatcctgcaggttcacgacgaactggtactcgaagtgaaagagggtctggtc
gagcaggtgaaagatgaaattcgcacgcaaatgagcaatgccgcgcagctggatgttccg
ctgctggtagaggtaggcgtgggctcgaattgggacgaagctcactga
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