Pseudomonas sp. VLB120: PVLB_00935
Help
Entry
PVLB_00935 CDS
T02897
Name
(GenBank) type I toxin efflux ATP-binding protein
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
psv
Pseudomonas sp. VLB120
Pathway
psv02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
psv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PVLB_00935
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psv02000
]
PVLB_00935
02044 Secretion system [BR:
psv02044
]
PVLB_00935
Transporters [BR:
psv02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
PVLB_00935
Secretion system [BR:
psv02044
]
Type I secretion system
Adhesin protein transporter
PVLB_00935
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
MMR_HSR1
Peptidase_C39
DUF87
AAA_29
ATP-synt_ab
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
AGZ32997
LinkDB
All DBs
Position
219773..221929
Genome browser
AA seq
718 aa
AA seq
DB search
MESEVGRVQLSHDPRSQHDDPLLDCLLTLCVLHQKPASRVMLTTGLPLPAQRLSPELLPR
AAARAGLQGRLLQRRLEQIPSIAMPAILLLKEGRAAVLLGWENADTARLLLSESDGGEVL
VSREALLSDYSGRVFFAQPQHKFDVNHGNLIPRARSWFRDTLLRSKWLYIDAIAASLVIN
LIALAAPLFVMNVYDRVVPNQATSTLWVLAVGITGAYVFDLILKGLRSLCLDLAGKKTDL
IISATLFERIVGMAMKYRPARVGSYAQNIHEFQGLRDFLASLTLTSLIDLPFTLIILMVI
AIIGGHLVWIPVLAFPLALGIGYALQKPLMATMEKTMALASERQSSLIETLAGLDAVKVN
NAESERQYMWEQTLGTLSRLELRVKVLSGLAMNITLLIQQLAGVAMICVGVYLIIDGSLS
MGGLVACYMLSGRALGPLGQLNGLLARYQQAKVTMAATDQMMELPQERNFEERPLRRQVL
QGAIEFRGVDFTYPNQQNQALKNVSLTIRPGEKVGIIGRSGSGKSSLAKLIVGLYEASNG
SLLVDGVDIRQIDVSELRHNIGYVPQDIQLLAGTLRDNLVSGARYIEDEMILQAAELSGV
HEFARLHPDGYELQVGERGQNLSGGQRQNVALGRALLLNPQILLLDEPTASMDNTGEERL
KQRLQAVIETKTVVLVTHRASLLSLVDRLVVIDRGQVVADGPKTAVMDALKKGQISVA
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
gtggaatccgaagtcggtcgagtccaactcagtcacgatccgcgtagtcagcacgacgat
cccctgctggactgtctgctgaccttgtgtgtgttgcatcaaaagcccgccagtcgggtg
atgctgaccaccggattgccactgcctgcccagcgcctgtcccccgagttgctaccccgt
gccgcagcccgcgccgggttgcaggggcgcttgctgcagcgcaggttggagcagattccc
agtatcgccatgcccgccatattgttgctcaaggagggccgcgccgctgttctgctgggc
tgggaaaacgccgacacggcacgcctgctgctcagcgagagcgacggtggcgaggtcctg
gtcagccgcgaagcattgcttagtgattacagtggccgtgtgttcttcgcccagccgcag
cacaagttcgatgtcaaccacggcaacctcatcccacgagcccgctcctggttccgcgat
acgctgctgcgcagcaaatggctttacatcgacgccatcgccgccagcctggtcattaac
ctgatcgctttggccgcaccactgttcgtgatgaacgtgtacgaccgagtcgtacccaac
caggccacctccaccctctgggtattggcggtgggcatcaccggggcctatgtcttcgac
cttatcctcaagggattgcgcagcctgtgcctggacctggctggcaagaagaccgacctg
atcatttcggcgacgctgttcgagcgcatcgtcggcatggcgatgaagtatcgcccggcg
cgggtcggcagttacgcgcagaacatccacgaattccaagggctgcgcgacttcctggcc
tcgttgacgctcaccagcctgatcgacctgccgttcaccctgatcatcctcatggtgatc
gcgatcatcggggggcacctggtatggattcccgtcctggccttcccgttggccctaggt
atcggctacgccttgcagaagcccttgatggcaaccatggaaaagaccatggcactggcc
tccgagcgtcagtcgagcctgatcgagaccttggcgggccttgacgcggtcaaggtcaac
aacgccgaaagcgaacgtcagtacatgtgggagcagaccctcggcaccctcagccgcctg
gagctacgggtcaaggtgctgtcgggtctggccatgaacatcaccctgttgatccagcaa
ctggccggggtcgcgatgatctgcgtcggcgtctacctcatcatcgacggcagcctcagc
atgggtggcctggtagcctgctatatgctcagcggccgtgcgctcggaccgctgggccag
cttaacgggctgctggcgcgctaccagcaggcgaaggtgaccatggctgccaccgaccag
atgatggagctgcctcaggagcgcaatttcgaagagcgtccgctcaggcgccaggtgctg
caaggcgccatcgagttccgtggtgttgatttcacctaccccaaccagcagaaccaggca
ctgaagaacgtcagccttaccattcgcccaggggagaaggtgggcatcatcggacgcagc
ggctcgggcaagagctcgctggccaaactcatcgtcggcctgtacgaagcttccaacggt
tcgctgttggtcgacggggtggacattcgccagatcgacgtcagcgaactgcgccacaac
atcggctacgtgccccaggatatccaactgctggccggcacccttcgcgataacctggtc
agtggtgcccgctacatcgaagacgagatgatcctgcaggccgccgagctgtccggcgtg
catgagttcgcccgcctgcaccccgatggctacgagctgcaggttggcgagcgcgggcag
aacctttccggcggccagcgccagaacgtcgccctgggccgggcactgctgctcaacccg
cagatcctgttgctcgacgaaccgaccgcgtccatggacaacaccggcgaagagcgcctc
aagcagcgcctgcaggcggtcatcgaaaccaagactgtggtgctggtgacccaccgcgct
tcgctgctgtcgctggtcgaccggctggtggtcatcgaccgtggccaagtggttgcagac
ggtccgaaaaccgccgtcatggatgcgctgaagaaggggcagatcagtgtcgcttag
DBGET
integrated database retrieval system
