Pseudomonas sp. VLB120: PVLB_02255
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Entry
PVLB_02255 CDS
T02897
Name
(GenBank) 16S ribosomal RNA methyltransferase RsmE
KO
K09761
16S rRNA (uracil1498-N3)-methyltransferase [EC:
2.1.1.193
]
Organism
psv
Pseudomonas sp. VLB120
Brite
KEGG Orthology (KO) [BR:
psv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psv03009
]
PVLB_02255
Enzymes [BR:
psv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.193 16S rRNA (uracil1498-N3)-methyltransferase
PVLB_02255
Ribosome biogenesis [BR:
psv03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
PVLB_02255
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltrans_RNA
PUA_4
Motif
Other DBs
NCBI-ProteinID:
AGZ33260
LinkDB
All DBs
Position
complement(519530..520249)
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AA seq
239 aa
AA seq
DB search
MRLSRFFIDAPLSPGEHDLPEAQAHYIGRVLRMAAGDAVQLFDGSGQEYLGQLLEVGKKS
VRVSLDQALPGQAESPLHIHLGQGLSRGERMDWAIQKATELGANEITPIVSERCEVRLKD
ERADKRLAHWRQVAISACEQCGRSTLPIIHPPVTLAEWLKSTEADLKLVLHPVAEPLTRH
AKPTRLAFLIGPEGGLSEAEVDQAKAAGYHAARLGPRVLRTETAPVVALSVAQQLWGDF
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgagactgtcccgcttcttcatagacgcccccctgagcccaggcgagcacgacctgccc
gaagcgcaggcccactacattggccgcgtgctgcgcatggcggctggcgatgccgtgcaa
ctgttcgacggcagcggccaggagtacctcggccaactattggaggtgggcaagaaaagc
gtacgcgtcagccttgaccaggctctgcctgggcaggccgaatcgccactgcacattcat
ctcggccagggcttgtcccgaggcgaacgcatggactgggcgattcagaaagccaccgag
cttggggcgaacgagattaccccaatcgtcagcgaacgctgtgaagtgcgcctgaaggac
gagcgcgccgacaagcgcctggcccattggcgccaggtggcgatcagcgcctgcgagcaa
tgtggccgatccaccctgccgatcattcaccctcccgtcaccctcgccgagtggctcaaa
agcaccgaagccgacctcaagctggtattgcacccggtagcagagcctctgacccgccac
gccaaaccgacgcgcctggccttcctgattggcccggaaggcggcctgagcgaagcggaa
gtcgaccaggcaaaagccgccggctaccacgccgcccggctcggcccacgggtgctgcgc
accgaaactgcaccggtggtggcgctgtcggtggcacagcagttgtggggcgacttctaa
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