Pseudomonas sp. VLB120: PVLB_02575
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Entry
PVLB_02575 CDS
T02897
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
psv
Pseudomonas sp. VLB120
Pathway
psv00730
Thiamine metabolism
psv01100
Metabolic pathways
psv01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
psv00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
PVLB_02575
Enzymes [BR:
psv01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
PVLB_02575
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Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
AGZ33324
UniProt:
A0AAN0QYV6
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Position
596373..598259
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AA seq
628 aa
AA seq
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MSKQEKTINLSESAQVDQQSVQPFPRSRKVYVEGSRPDIRVPMREISLHDTPTDFGGETN
APVLVYDTSGPYTDPNVVIDVRKGLADVRSSWIDARGDTLRLDGLSSDFGQQRLNDAELA
KLRFAHVRNPRRAKPGANVTQMHYARQGIITAEMEYVAIRENMKLQEARAAGLLNQQHAG
HSFGASIPKEITPEFVREEIARGRAIIPANINHPELEPMIIGRNFLVKINGNIGNSALGS
SIEEEVAKLTWGIRWGSDTVMDLSTGKHIHETREWIIRNSPVPIGTVPIYQALEKVNGIA
EDLTWELFRDTLIEQAEQGVDYFTIHAGVLLRYVPLTAKRVTGIVSRGGSIMAKWCLAHH
KENFLYTHFDEICEIMKAYDVSFSLGDGLRPGSIADANDAAQFGELETLGELTKIAWKHD
VQCMIEGPGHVPMQLIKENMDKQLECCDEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGW
FGCAMLCYVTPKEHLGLPNKDDVKTGIITYKIAAHAADLAKGHPGAQIRDNALSKARFEF
RWEDQFNLGLDPDTARAFHDETLPKESAKVAHFCSMCGPKFCSMKITQEVREYAANQRID
SVDVSVEEGMREQAERFRQEGSQLYKKV
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaacaagaaaaaacgatcaacctcagcgagtcggcacaagtcgaccagcagtcc
gtgcaacccttcccgcgttcgcgcaaggtgtacgtcgaaggttcgcgcccggacatccgc
gtgcccatgcgcgagatcagcctgcacgacacccccaccgattttggcggcgagaccaac
gcaccggtgctggtctatgacacctccggtccctacaccgaccccaatgtcgtcattgac
gtgcgcaaaggcttggccgatgttcgttcgtcctggatcgatgcccgtggcgacaccctg
cgcctggacgggctgagctctgatttcggccagcagcgcctgaacgatgccgagctggcc
aagctgcgcttcgcccatgtgcgcaatccgcgtcgcgccaagcctggtgccaacgtcacg
cagatgcactacgcccgccagggcatcatcaccgccgagatggaatacgttgccatccgc
gaaaacatgaagctgcaggaagcccgcgccgccggcctgctgaaccagcagcacgctggc
cacagcttcggtgccagcatcccgaaggaaatcacacccgagttcgttcgcgaggaaatc
gctcgcggccgcgcgatcatcccggccaacatcaaccaccctgaactggagccgatgatc
atcggccgcaacttcctggtgaagatcaatggcaacatcggcaacagtgccctgggttcc
tccatcgaggaagaagtggccaaactgacctggggtatccgctggggctcggataccgtc
atggacctgtccaccggcaagcacatccatgaaacccgcgagtggatcatccgcaactcg
ccggtgccgatcggcacggtgccgatctaccaggccctggaaaaggtcaatggtatcgct
gaggacctgacctgggagttgttccgcgacaccctgatcgaacaggccgagcagggcgtt
gactacttcaccatccatgctggcgtactgctgcgctacgtgccgctgaccgccaagcgg
gttaccggcatcgtcagccgtggcggctcgatcatggccaagtggtgcctggcgcatcac
aaggaaaacttcctgtacacgcacttcgacgagatctgcgaaatcatgaaggcctacgac
gtcagcttctcgctgggcgatggtctgcgcccaggctcgatcgccgacgccaatgacgcc
gcccagttcggtgaactggaaaccctcggcgagctgaccaagatcgcctggaaacacgac
gtgcagtgcatgatcgaaggtcctggccatgtgccgatgcagttgatcaaagagaacatg
gacaagcagctggagtgctgtgacgaggcgccgttctacaccctcggtccgctgacgacc
gacatcgccccaggctacgaccacatcacctctggcattggtgcggcgatgatcggttgg
ttcggttgcgccatgctttgctatgtaacccccaaggagcacctgggcctgccgaacaag
gatgacgtcaagaccggcatcatcacctacaagatcgccgcccatgcggccgaccttgcc
aaaggccaccctggcgcgcaaattcgtgacaacgccttgtccaaggcgcgcttcgaattc
cgttgggaagaccagttcaacctcggtctggacccggacactgcccgcgcgttccacgac
gagaccctgccgaaggagtcggccaaggtcgcccacttctgctcaatgtgcgggccgaag
ttctgttcgatgaagatcacccaggaagtacgtgaatatgccgccaaccagcgtatcgac
tcggtcgatgtgtcggttgaggagggcatgcgcgagcaggccgagcggttccgccaggaa
ggtagccagctctacaaaaaggtgtaa
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